Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00450 ATGGCGGAACCTTCCACTTCAGATGTTTCAGTCTATTCCACAGACAACAAGTTCTGGAAAGGGGCATTTGCTGTCGCTGGAATCATGCTTACCCTCGTTACTTATGGTGTCTTGCAGGAAAAGATCATGAGAGTACCGTATGGGGCAGAAAAAGAGTATTTCAAGTATTCACTGTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTTTCTGCTGCTTCTTTGCTGGCAAGTAAAAAAACGATGGACCCTGTAGCTCCCATTTATAAGTATTGCCTTATCTCGGTATCAAACATACTAACTACAACTTGCCAGTATGAGGCCCTTAAATATGTTAGTTTTCCCGTTCAGACCCTTGCAAAATGTGCAAAAATGATACCAGTTATGGTATGGGGTATTCTCATTATGCAGAAGAGATATCAGGGGCCTGACTATTTGTTGGCCTTTTCAATTACCCTTGGCTGCTCAGTATTTATCCTATATCCGGCAGGAACCGACATAAGTCCTTACAGTAGAGGAAGGGAAAATACAGTTTGGGGCATTCTCCTAATGATTGGCTATCTTGGGTTTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAAAGGCTATGACATGGAGATATATAATCAGATATTTTACACAACATTGTGTTCTTGTATTCTTAGCCTGACAGGTCTTATCATACAAGGACATTTAATACCAGCAATAGAGTTTGTTTATCACCATCATGACTGTTTCTTTGACATAGCATTACTTTCGACTGTTGCGACAATTAGTCAATTTTTTATTTCCTACACAATTCGCACTTTTGGTGCTTTGACATTTGCAACCATAATGACCACGAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTTCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTCATTGTCTTTGGCTCCCTTTATGCAAAAAGCTTCTCGCGGAAAGCACCTCAAAAGACAACCCCCTCTGAAGCACTTGTGCAAAATGGGGATTCAAATAATTTGAAGGACAATCCGTGA 1047 0.4097 MAEPSTSDVSVYSTDNKFWKGAFAVAGIMLTLVTYGVLQEKIMRVPYGAEKEYFKYSLFLVFCNRITTSAVSAASLLASKKTMDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGILIMQKRYQGPDYLLAFSITLGCSVFILYPAGTDISPYSRGRENTVWGILLMIGYLGFDGFTSTFQDKLFKGYDMEIYNQIFYTTLCSCILSLTGLIIQGHLIPAIEFVYHHHDCFFDIALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWEQWIGAVIVFGSLYAKSFSRKAPQKTTPSEALVQNGDSNNLKDNP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00450 348 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 1 332 - -
Cca10g00450 348 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 1 332 IPR013657 GO:0055085
Cca10g00450 348 MobiDBLite consensus disorder prediction 327 348 - -
Cca10g00450 348 Pfam UAA transporter family 22 321 IPR013657 GO:0055085
Cca10g00450 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00450 Cca-Chr10 4638279 4645588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00450 1 337 Organic Solute Cotransporters AT5G59740 77.876 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00450 K15276 - gmx:100789415 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00450 10 4638279 4645588 Cca10g00450 10 4638279 4645588 ECH
Cca10g00450 10 4638279 4645588 Cca04g00688 04 6722051 6727589 PCT