Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00688 ATGGCGGAAACAACCTCTGCTTTGGTTTCTTCTCCTTCGGGTGATTCGAATTGGAGAGAGAACAAGTTGTGGAAAGGCACGTTTGCGGTCTCCGGAATCATGCTCACCCTCGTTACCTATGGCGTATTGCAGGAAAAGATCATGAGAGTCCCTTATGGGGTGAACAAGGACTACTTCAAATATTCTCTTTTTCTTGTTTTCTGCAACCGAATCACAACGTCTGCTGTTTCGGCGGGTGCTTTACTGGCAAGCAAAAAGGCATTGGATCCTGTAGCTCCCATTTATAAGTATTGTCTTGTGTCAGTGTCAAACATACTGACCACAAGTTGTCAGTATGAGGCCCTCAAATATGTTAGTTTTCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACTATCATAATGCAGAAGAGATATCGAGGACCTGACTATTTGTTGGCCTTTGTAGTAACTCTTGGCTGCTCAGTGTTCATCATGTATCCCGCAGGGACCGACATAAGTCCATATGGTAGAGGAAGAGAAAATACTGTTTGGGGCGTTTTGCTAATGATGGGTTATCTTGGGTGTGACGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGTGTTCTTAGCCTGACAGGTCTTATCATACAAGGACATTTATTACCAGCAATAGAGTTTGTTTATATTCACAAGGATTGTTTCTTTGACATTGTATTGCTTTCTACCGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGCACATTTGGTGCTCTAACATTTGCTACTATAATGACAACAAGACAGTTAGTAAGCATTATGCTATCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTAATTGTCTTTGGCGCCATTTATGCCAAAAGCTTCATGAGAAAAGCACCTGAAAAGACAACCTCTTCTGTAGAACAATCTGTACAAAATGGAAATTCAAATAACTTAAAGGAGAACCCATGA 1065 0.4094 MAETTSALVSSPSGDSNWRENKLWKGTFAVSGIMLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALLASKKALDPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTIIMQKRYRGPDYLLAFVVTLGCSVFIMYPAGTDISPYGRGRENTVWGVLLMMGYLGCDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSLTGLIIQGHLLPAIEFVYIHKDCFFDIVLLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAVIVFGAIYAKSFMRKAPEKTTSSVEQSVQNGNSNNLKENP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00688 354 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 17 339 - -
Cca04g00688 354 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
Cca04g00688 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 323 - -
Cca04g00688 354 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 17 339 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00688 Cca-Chr4 6722051 6727589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00688 19 335 Organic Solute Cotransporters AT5G59740 82.334 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00688 K15276 - gmx:100782423 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00688 04 6722051 6727589 Cca04g00688 04 6722051 6727589 ECH
Cca10g00450 10 4638279 4645588 Cca04g00688 04 6722051 6727589 PCT