Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00389 ATGCCTGAACGCACCTACAGACATGTTGATACCACCAGAACTCATACCATCGGTAGCGTCGAACAATTCCTCCGAGGTACAGGAGGAGATTCTTCGAGGATGTCATCATCGTACTCTCCCACGTCCACTAATTCCCCTTCCTCTCCTTACTTTGAGAGGTTGAAGCAACATGATCCCGAAGACGACCATGGCCTCTATCAGAAGAAATCAGTTCTCACCAAAGTCAAGGAGAAGGCCAGGAAACTCCGCAACAGCCTCAGCAAGAGAAGACTCGACGAAAATTTCACACCCTCCTGGGGTGTTAGCTTAgatgatgatcatgatgaggaagaagaagtagatgCCGAATACCTTGGAGCTCCAATGTATGAATCAGAGCTGGCACCTGAGGGATACAAAGAAAATGCAAGGCAACATCCAAGAGCAAATCCAGTAATATCTGAGAAGCATGTTTTGCACAACACTGTCAAACTAGGAGTGGAACATGATCGAGAGAAGCCACGTGTCATGAACGCCACCACAACTCCAAACATGTCACAAGTCTATGGTGGAGGGTCAAATGCAGCAGCACTTTCTTTAGCCTCAAAACTTCAAACTGCTCCAAGGGATGATGCCAAAACTACTTTGTCTCCAATTCAAAACTCATCAACCTCATCTGCTTCATTGAGTGGAAAAAATATAATCCACAAGAGTGCTTCAATCAAAGATTATCCAATGAACATATTTGAGCCAAGAAGGGATGATGCCAAAACTCTGTCTTCGTTGCAACATTCATCATCCTCATCTGCTTCATTGAGTGGGAAGAATACAAGCCAAAAGAGTGCTCTTCTTAGAGATTATTCAATGAACAAGTCTGAGCCGAGCGATGATATGAAAACTGTAGTGTCTCAGCCTCAGGTAACATCTGAAGCAATGAGTCCAAGGAAAAGTTCTAATAATGGAGGTGTGTTGGAAAAGGTGAAAGGAGCTGTGAATTCATTGCTCGGGAATGAGGAACCATCACAACAATATGGAGTCAAAATTGCTACTAAACGCAATTCGCCTCAAACTCCGCAAGTTGGTCAGGAAGAGAACTGTGGCAGAATTCTACAGGCAAATTAA 1101 0.4278 MPERTYRHVDTTRTHTIGSVEQFLRGTGGDSSRMSSSYSPTSTNSPSSPYFERLKQHDPEDDHGLYQKKSVLTKVKEKARKLRNSLSKRRLDENFTPSWGVSLDDDHDEEEEVDAEYLGAPMYESELAPEGYKENARQHPRANPVISEKHVLHNTVKLGVEHDREKPRVMNATTTPNMSQVYGGGSNAAALSLASKLQTAPRDDAKTTLSPIQNSSTSSASLSGKNIIHKSASIKDYPMNIFEPRRDDAKTLSSLQHSSSSSASLSGKNTSQKSALLRDYSMNKSEPSDDMKTVVSQPQVTSEAMSPRKSSNNGGVLEKVKGAVNSLLGNEEPSQQYGVKIATKRNSPQTPQVGQEENCGRILQAN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00389 366 MobiDBLite consensus disorder prediction 249 318 - -
Cca10g00389 366 MobiDBLite consensus disorder prediction 253 313 - -
Cca10g00389 366 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 19 366 IPR037491 GO:0009737
Cca10g00389 366 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 19 366 - -
Cca10g00389 366 MobiDBLite consensus disorder prediction 12 51 - -
Cca10g00389 366 MobiDBLite consensus disorder prediction 202 223 - -
Cca10g00389 366 MobiDBLite consensus disorder prediction 1 66 - -
Cca10g00389 366 MobiDBLite consensus disorder prediction 343 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00389 Cca-Chr10 4091252 4093409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00389 - - ccaj:109805666 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00389 10 4091252 4093409 Cca04g00606 04 6027670 6029936 PCT