Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00353 ATGACCATGGACAAAGCATCGCAAAGCAGCTCCGATTCCCCCACCCGAGACCCCAAGGTGGTGTCCATCGAATGCCTCAGAGGAAGCTCCAAGGGCGACGAGTGGAGCGCCGACATGCTCCAGAGCGGTGACGTCGTCGAGGACCTCCGGATCGGGTCGTCGCCGACCTCGCGGATCCGCTACCAGGCGCCGTTCAAGGGCGGAAAGAGCGGCGTCCAGAGGATTCTTCAGGAGTCCTACAGGAAGAAGGAGACGTCGATCGCGGTGAGAGTGCGGCGAGGCTCCGACGAGTTGGCGGAGCTGCAGGCGTGCATCGTGCCTAACGAGCTCGCGGCGAAGAAGAGCTTCGTGCTTCGCTCGATTTCCGATCCGAATTACGTGGTAGGGTTTGTGGATCGGACTGAGGCGGAATGCTTCGAGATTCAAGCTTCAAGGAGCACTAGGATGGTAAATGCGCTAACCAGAACCAAGCTTCAGGATGGATATGTTTCATATTCATGGGAAAGAAGGATGCAGGAAATGCTATCAGTTCCCAATTCTAGCAACTTCCTTTCCTTATTATTTCTTCCCAAAGCTTCAGATCGTGTAGCTTCTCGCTACAATGATCTGGAGGATACCCTAGCTCGGGCAAATGCATGGCTCAATGCAGGTCAAGCTTCAGGTGTCCCTATTGTCTTCATGAACATCCAAACAGAGTCCCTACTTACTAAGATATCTGGAGAGACCGCTTCTTCCACTGTGAATGCAGGGTCATTATCTGACTTAGCTAACTTATCAAATGCAAGCCTTTACGGCTTTGAGGATTACCATGGAATAGACATTGGTGTTGTTCGAGCAATTCGCCTATGGTATGCTCCAGTTGCAGGAGAGTTATCTATTGAGATCAAACTCAAAGAGGAAGATGCAAAGCTTGGCTTTGCCATTAGTCGTACCGAAGAGGGATTTATTTTCATCTCATCAGTTATTAATCAAGAAAATGTGCCTGCTACAAGATCAGGGCTGAGCAATCTGTACAAACTAGCAACGGATACTTGTAGGCTATTGGTAGTTTCAAGAGTGTCAAATCAAAAAGTCCTTCCATGGATGGTTTCTTCAACAGGAGCCATTCGGTGTTATGACACTGTTTCACTGAGCCAGAAGCTCTCATTGCATCGACACACCAAAGTTCCCATTCTCCTGCATGTCTTGCTTTGGGACCGGGCTTTGGCTTCTTCAAGTGGAGGAAGCACTAGGTTTAAGAATCTCTCTTCTTCTGTGTTTCCATCACTATCATCTGAAGTTCAAGTACCGCGCCTTCCAAACGAAACCCATGTACTGCCACTGCCCCCTCCACCCTCCGAACCAAGTGATGATACAAGTGAAATTTCGCAGTCCAGGCTTGAGAGAGACACAGCTGGTGAATCCTCTTTTAGATTCCATGATTTTTCCTTGTCCAGCAACTGGGTATGA 1449 0.4921 MTMDKASQSSSDSPTRDPKVVSIECLRGSSKGDEWSADMLQSGDVVEDLRIGSSPTSRIRYQAPFKGGKSGVQRILQESYRKKETSIAVRVRRGSDELAELQACIVPNELAAKKSFVLRSISDPNYVVGFVDRTEAECFEIQASRSTRMVNALTRTKLQDGYVSYSWERRMQEMLSVPNSSNFLSLLFLPKASDRVASRYNDLEDTLARANAWLNAGQASGVPIVFMNIQTESLLTKISGETASSTVNAGSLSDLANLSNASLYGFEDYHGIDIGVVRAIRLWYAPVAGELSIEIKLKEEDAKLGFAISRTEEGFIFISSVINQENVPATRSGLSNLYKLATDTCRLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHTKVPILLHVLLWDRALASSSGGSTRFKNLSSSVFPSLSSEVQVPRLPNETHVLPLPPPPSEPSDDTSEISQSRLERDTAGESSFRFHDFSLSSNWV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00353 482 PANTHER - 1 482 - -
Cca10g00353 482 MobiDBLite consensus disorder prediction 434 465 - -
Cca10g00353 482 MobiDBLite consensus disorder prediction 1 17 - -
Cca10g00353 482 PANTHER OS02G0717600 PROTEIN 1 482 - -
Cca10g00353 482 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00353 Cca-Chr10 3741083 3746068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00353 - - gmx:100798931 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00353 10 3741083 3746068 Cca10g00353 10 3741083 3746068 ECH
Cca10g00353 10 3741083 3746068 Cca04g00555 04 5492138 5495851 PCT