Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00555 ATGACCATGGACCGAGCGTCACAGAGCAGTTCAGACTCGCCGTCGCGAGAGTCGAAAGTGTTGTCCATAGAATGTCTCAAAGGAAGCTCGAAAGCAGATGAGTGGACCGGAGACATGCTTCAAAGCGGAGACATCGTGGAAGAGCTTCGAATCGGAGCTTCCCCCAACGCGCTTATACGCTTCAAATCGCCCTTCAAAAACGGGAAAAGCGGCGTCAACAAGATCCTCCAAGACTCTTACAAGAAGAAAGAGACATCCATCCTCGTTCGGGTTCGCCGCGGACCCCACGAGTTCGCCGAGTTGCAAGCCTGCATCGTTCCCAACGACTCCTCCGGGAAGAAGCAATACGTTCTCCGCTCCATCACTGACCCTAACTACGTCGTTGGATTCTCGAATCGAACCGAAACCGAGTGTTTCCAACTCCAAGCTTCAAGGACCACCAGGATGGTAAATGCGCTATCTAGGACGCGGTTACAGGATGGATATGTGTCGTATCCATGGGAAAGGAGGATGCAAGAGCAGCTATCAGTTCCCAATTCTAGCAATTTTCTTTCCATATTACTTCTTCCCAAAGTTTCAGATAGGATAGCTTCTCGCTACAATGATGTGGAGGACACACTAGCCAGGGCAAATACATGGCTCAATGCTGCTCAAGCTTCTGGGGTCCCTATTGTCTTTATGAACATCCAAACCGAGTCCCTACTTACCAAGATCTCAGGAGAGACAGCTTCTTCCACTGTAAATGCAGGGTCATTATCTGACTTATCTAACCTTGCAAATGCAAGCCTTTATGGTTTTGAGGATTATCATGGAGTAGATATTGGTGTTGTTAGAGCAGTTCGGCTCTGGTATGCTCCAATCGGAGGAGAGTTCTCAATTGAGATAAAACTAAAAGAGGATGATACAAAGCTTGGCTTTGCCATTAGTCGTACAGAAGAGGGTTTTATTTTCATCTCAACAGTTATTGATGATGGCCAAGAAAATGTACCAGCCACACGTTCAGGACTGAGCAATCTGTACAAGGCAGCATCAGACACTTCAAGGTTGTTGGTAGTTTCTAGACTTTCAAATCAGACAGTCCTCCCATGGATGGTTTCTTCAACAGGAGCCATTAGGTGTTATGACACTGTTTCATTGAGCCAGAAACTCTCATTGCATAGACACACCAAAGTTCCTATTCTCCTGCATGTCTTCCTTTGGGACCGAGCATTGGCCTCTTCAAGTGTTGAAAGTACAAGATTGTCTCCCTCGGTGTTGGCATTACCATTACCATTACCAGCTGAAGGGTCTGGTCCAGGTGGTGGTGTCAGCAGTGATGGTTCCCAGCCAATGCAGCTTGAGAGAGACACAGCTGGGGATCTTTCTTTCAGATTCCACAACTTCTCTTTGTCCAGCAACTGGGTATGA 1407 0.4726 MTMDRASQSSSDSPSRESKVLSIECLKGSSKADEWTGDMLQSGDIVEELRIGASPNALIRFKSPFKNGKSGVNKILQDSYKKKETSILVRVRRGPHEFAELQACIVPNDSSGKKQYVLRSITDPNYVVGFSNRTETECFQLQASRTTRMVNALSRTRLQDGYVSYPWERRMQEQLSVPNSSNFLSILLLPKVSDRIASRYNDVEDTLARANTWLNAAQASGVPIVFMNIQTESLLTKISGETASSTVNAGSLSDLSNLANASLYGFEDYHGVDIGVVRAVRLWYAPIGGEFSIEIKLKEDDTKLGFAISRTEEGFIFISTVIDDGQENVPATRSGLSNLYKAASDTSRLLVVSRLSNQTVLPWMVSSTGAIRCYDTVSLSQKLSLHRHTKVPILLHVFLWDRALASSSVESTRLSPSVLALPLPLPAEGSGPGGGVSSDGSQPMQLERDTAGDLSFRFHNFSLSSNWV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00555 468 PANTHER - 1 468 - -
Cca04g00555 468 PANTHER OS02G0717600 PROTEIN 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00555 Cca-Chr4 5492138 5495851 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00555 - - gmx:100815203 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00555 04 5492138 5495851 Cca04g00555 04 5492138 5495851 ECH
Cca10g00353 10 3741083 3746068 Cca04g00555 04 5492138 5495851 PCT