Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00332 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGTAACCTCTGTGTGTTTTGTCCTTCTCTGCGAGCAAGATCAAGGCAACCGGTGAAACGTTACAAGAAGTTGATTGCTGATATCTTCCCGCGTAATCAGGTTGCTGAGCCTAATGATAGGATAATTGGAAAGCTATGTGAGTACGCTTCTAAGAATCCATTGAGAATTCCCAAGATTACTGATAACTTGGAGCAAAGATGTTACAAGGATTTACGTAATGAAAGCTTTGGTTCAGTGAAAGTGGTCTTGTGTATATACAGGAAATTGCTATCGACATGTAAGGGACAGATGCCTCTATTTGCCAATAGTTTATTAGGGATCATCCAGACTCTTCTAGAGCAAACTCGATCAGATGAAATGCAGATCTTAGGTTGCAATACTCTTGTAGAATTTATTGATTGCCAGACAGATGGTACATACATGTTCAACTTAGAGGGTTTTATACCAAAACTATGTCAATTGGCTCATGAAGTGGGAAATAATGAACAAACTCTGCATCTACGTTCAGCTGGACTACAAGCTTTATCCTATATGGTGCGGTACATGGGCGAGCACTCACATCTTTCAATGGATTTTGACAAAATTATATCAGTGGTTTTGGAGAATTACTTGGATATCCAATCCAAATCCAATCTTGCCAAAGTAGAGAAACTGAATTCACAATCTCAGAACCAGTTGGCCCAAGGATTTCCCATAGAAGGAGACCGACTACATTCTTTATCTAAGAAGGATCCTTCCTTACTCAATAATGTGACAAGAACCGAGACGGAGTCAAAGTTGGATACTGCTAAAGATCCTGCTTATTGGTCAAAGGTTTGCTTGTATAATATGGCAAAATTGGCAAAGGAAGCTTCAACTGTGCGGCGTGTCCTTGAACCACTTTTTCATAATTTTGATATTGATAACCACTGGTCTTCTGAAAAGGGAGTTGCTTCTTGTGTTTTGATTTATTTGCAATCCCTTCTAGCAGAATCAGGAGATAACTCCCATCTTCTACTATCCATTTTGGTCAAGCACTTGGATCACAAGAATGTTGCCAAGCAGCCTATCCGTCAGATTGATATTATTAACACCACCACGCAGCTTGCACAAAATGTGAAGCAGCATACTTCAGTTGCAATCGTTGGTGCAATATCTGACCTCATTAAGCATTTAAGGAGATGCCTCCAAAATTTAACTGAAGCATCCAGCATTGGAAATGATGCATATAGGTTGAATACTGAACTTCAGTCTGCCTTAGAAATGTGTATATTACAACTTTCAAGCAAGGTTGGAGATGTAGGACCAATTCTTGATTTGATGGCTGTGGCACTGGAGAATATCCCAATTACTACCATCATAGCAAGAACAACAATTTCTGCTGTCTATCAAACAGCAAAATTAATCACTTCCATCCCCAATGTGTCATATCACAATAAGGCTTTCCCTGATGCCTTGTTTCATCAATTGCTCCTGGCCATGGCTCATCCTGACCGTGAAACACAAATTGGAGCACATAGTGTCTTCTCTATGGTGCTTATGCCATCCATGTTTTCTCCTTCGTTAGACCACAAAACAAAGATTGCTCAGAAGGCACAGAATGTCAGCTTCTCCACTCAGCATGGAACTTTTTCTGGAGCTGAAAACTTGAATGGAAAACTGGAAGAAGGAAAGGCAATAGCCAGTGCCAATGGGAAGAAATATGCAATTCATCCATATGGCAGTTACGGCTTTACTCCTGAGCTAGCTGATAGAAAAGATGATCTAAGTTCTCTTAGGCTGAGCAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGTGGAAAACGGTCCTGCAAATTATGAGGCAATGGCGCACACCTATAGCATTGCTTTATTATTTACTCGTTCTAAGGCATCGAGTTACATGGCTTTAGTAAGATGTTTCCAACTGGCATTCTCCCTCAGGAGCATCTCTTTGGACCAAGAAGGAGGTTTACAACCATCTCGCAGGAGGTCCCTTTTTACCTTGGCTTCATACATGCTTCTATTCTCTGCCAGGGCTGGCAATGTCCCTGATCTAATTCCAAAAGTTAAAGCATCACTGACAGTAGCAACAGTAGATCCTTTTCTTGAATTGGTCGATGATATCCGGCTGCAGGCTGTCTGTATAGAATCAGAGAAAATTTATGGATCTCAGGAAGATGAGGTTGCTGCTGTGAAGTCTCTTTCAGCTGTAGAATTGGATGACAAGCAGTTGAAAGAGACTGTAATATCGTACTTTATGACTAAATTTACAAGATTGCCTGAGGATGAGTTGTCTAGCATAAAGAATCAACTTCTACAAGGTTTTTCCCCTGATGATGCATATCCATCGGGACCACCATTATTTATGGAGACACCAAGACCATGTTCTCCACTTGCTCAGATTGAGTTCCCAAATTTTGTTGAGATAATGGCTCCGGATGATTTGATGGATGAAGAGACTGGACATGAACATAGTGGAAGTCAATCAGATTACAAAACATCACTGTCAACCAACTATCCTGATGTTCTGAGTGTTAATCAGCTCTTGGATTCGGTTTTGGAAACTGCCCGGCAAGTTGCAAGTGTCTCCACTTCCTCAACTCCTTTACCTTATGACCAAATGAAGAACCAGTGCGAGGCACTTGTAACAGGCAAACAACAGAAGATGTCAGTCATTCAGAGTTTCAAGCATCAACAGGAGGAGTGTAAGGCCATAATTCTTTCAAGTGAAAATGAAGTAGATGGTTTCCCTGTATCTGTTAAGGCACTGGAATATTCAAAAGGTGATTTGAAGTTAGTGACTCAGCAGCAATTTCAAGCACGTTACAGTTCTCATGACTCTGGGCAGCTACATTCTTTGAGATTACCACCTTCAAGCCCCTTTGATAAATTCTTGAGAGCTGCGGGATGCTAA 2952 0.4133 MGVMSRRVVPVCGNLCVFCPSLRARSRQPVKRYKKLIADIFPRNQVAEPNDRIIGKLCEYASKNPLRIPKITDNLEQRCYKDLRNESFGSVKVVLCIYRKLLSTCKGQMPLFANSLLGIIQTLLEQTRSDEMQILGCNTLVEFIDCQTDGTYMFNLEGFIPKLCQLAHEVGNNEQTLHLRSAGLQALSYMVRYMGEHSHLSMDFDKIISVVLENYLDIQSKSNLAKVEKLNSQSQNQLAQGFPIEGDRLHSLSKKDPSLLNNVTRTETESKLDTAKDPAYWSKVCLYNMAKLAKEASTVRRVLEPLFHNFDIDNHWSSEKGVASCVLIYLQSLLAESGDNSHLLLSILVKHLDHKNVAKQPIRQIDIINTTTQLAQNVKQHTSVAIVGAISDLIKHLRRCLQNLTEASSIGNDAYRLNTELQSALEMCILQLSSKVGDVGPILDLMAVALENIPITTIIARTTISAVYQTAKLITSIPNVSYHNKAFPDALFHQLLLAMAHPDRETQIGAHSVFSMVLMPSMFSPSLDHKTKIAQKAQNVSFSTQHGTFSGAENLNGKLEEGKAIASANGKKYAIHPYGSYGFTPELADRKDDLSSLRLSSHQVSLLLSSIWVQATSVENGPANYEAMAHTYSIALLFTRSKASSYMALVRCFQLAFSLRSISLDQEGGLQPSRRRSLFTLASYMLLFSARAGNVPDLIPKVKASLTVATVDPFLELVDDIRLQAVCIESEKIYGSQEDEVAAVKSLSAVELDDKQLKETVISYFMTKFTRLPEDELSSIKNQLLQGFSPDDAYPSGPPLFMETPRPCSPLAQIEFPNFVEIMAPDDLMDEETGHEHSGSQSDYKTSLSTNYPDVLSVNQLLDSVLETARQVASVSTSSTPLPYDQMKNQCEALVTGKQQKMSVIQSFKHQQEECKAIILSSENEVDGFPVSVKALEYSKGDLKLVTQQQFQARYSSHDSGQLHSLRLPPSSPFDKFLRAAGC 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00332 983 PANTHER CYCLIN-LIKE PROTEIN 1 983 - -
Cca10g00332 983 PANTHER PUTATIVE, EXPRESSED-RELATED 1 983 - -
Cca10g00332 983 SUPERFAMILY ARM repeat 70 516 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00332 Cca-Chr10 3498264 3509951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00332 K21842 - gmx:100806860 1639.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00332 10 3498264 3509951 Cca04g00529 04 5166950 5178552 PCT