Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00529 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGCAACCTCTGTTGCATCTGTCCTGCTCTGCGGGCAAGCTCCAGACAACCGGTGAAACGATACAAGAAGTTGCTAGCTGAAATTTTCCCACGCAACCAGGAGGCTGAACCTAATGATAGAAAAATTGGAAAACTATGTGACTATGCTTCTAAGAACCCACTGAGAATTCCCAAGATTACTGATAACTTGGAGCAAATATGTTACAAGGATTTGCGTTATGAAACCTTTGGCTCAGTCAAAGTTGTCTTGTGCATATACAGGAAATTCTTATCGTCATGTAAAGAGCAGATGCCACTTTTTGCTGGTAGCTTGTTAGAGATCATTCGGATTCTTCTAGAACAAACCCGAACAGATGAAATCAGGATCTTAGGCTGCAACACACTTCTTGATTTTTTAGATTGCCAGACAGACGGTACATACATGTTCAACTTAGAGGGTTTTATTCCTAAACTATGTCAACTGGCTCAAGAAGTGGGGGAAGATGAGCGAGCTCTGCGGCTACGCTCAGCTGGACTACAATCTCTATCCTATATGGTACGTTTCATGGGTGAGCACTCACATCTTTCAATGGATTTGGATGAAATCATTTCAGTGACTTTGGAGAATTACCCTAATCTCCAATATAACTCCAGATCTGCTTTGGAAGATAAATTGAATTCAGAGTCCCTGGACCTGTTAGTACAGGGATTTCCTAAAGTGGAAGATCCTTTAACAGATATCACTAAGAAGGATCCTTTGTTGCTGAAAGCTTCCACAGAAACTGAGATGGACTCTGTGTTGGACACTGCTAAAGATCCTACATATTGGTCAAAAATTTGCTTGTATAATATGGTCAAATTGGCGAGAGAAGCTACAACATTAAGGCGTGTCCTTGAACCTCTTTTTCATTATTTTGATACCGAAAGTCAATGGTCTGCAGATAAAGGAGTCGCTGCTCATGTTTTGTTGTACTTACAATCTCTTTTAGCAGAATCAGGAGATAACTCCTGTCTTCTGTTGTCCAATTTGATTAAGCACTTGGATCATAAGAATGTTGCTAAGCAGCCTATCCTTCAGATTAATATTATTAACACTACAACAAAACTTGCACAAAATGTGAAGCAACAGGCTTCGGTTGCAATTCTTGGTGCAATATCTGATCTCATTAAACATTTGAGGAAGTGTCTGCAAAATTCAGCCGAAGCTTCCAGCATTGGAAATGATGGGTCTAAGTTGAATACTGAACTTCAATTTGCCTTGGAAATGTGTATATTACATCTCTCCAACAAGGTTGGGGATATAGGACCCATTCTTGATTTGATGGCTGTGATGTTAGAGAATCTCTCAACTACAACCCTCATAGCAAGAACAACAATCTCTGCCGTTTATCAAACTGCAAAATTAATCACGTCAATCCCTAATGTATCATATCACAAGAAGCCTTTCCCTGATGCTTTGTTTCATCAATTGCTCCTGGCAATGGCTCATCCTGACCATGAAACACGAGTTGGAGCACACAGTGTCTTCTCTTTGGTGCTTATGCCATCTCCATTTTCTCCCCAGTCGGACCATAAAACAAAGATGTCTCAGAATGTACCAAGCGAAATCTTCTCCATTCAGCATGAAAGCTTTTTAGGAGCAGAACAGATCAACGGGAAACGCATGGAAGGAAAGGCAGCAGTTGGTGTTAGTGGGAAATATGCAGTTCATCCATATCATGGTTACATCTTTTCTTGTGCTCTAACTGATGGAAAAGATGAGCTAAGTTCTTTTCGGTTAAGCAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGTGGACAGTGGCCCTGCAAATTTTGAGGCAATGGGTCACACTTATAGCATTGCTTTATTGTTCACTCGTTCAAAGACATCCAGTTACACGGCTTTAGTAAGATGTTTCCAACTGGCATTTTCCCTCATGAGCCTCTCTTTGGACCAAGAAGGAGGTTTACAACCATCTCGCAGGAGGTCTCTTTTTACCTTGGCATCGTACATGCTTATATTCTCAGCCAGGGCAGGCAATTTCCTTGAGCTAATTCCAAAAGTTAAAGCATCCCTGACAAAGACAACCGTAGATCCTTTTCTTGAGTTGGTCGATGATGTCAGGTTGCAGGCTGTTTACATAGAATCAGAGAAGATAATTTATGGATCTCAGGAAGATGATGTTTCAGCTATGAAATCATTATCAGCAGTAAAATTGGATGACAAGCAGTTGAAAGAGACTGTAATATCATGCTTCCTGACTAAATTTTCAAAATTATCAGAGGATGAGTTGTCAAGCATAAAGAAACAACTTGTACAGGGATTTTCCCCTGATGATGCATATCCGTTGGGACCTCCACTGTTTATGGAGACACCAAGGGAATCTTCTCCACTTGCTCAGATTGAGTTCCCAGATTTTGATGAGATTGTGGCTCCAGTAGCTTTGATAGATGAAGAGACTAGGCTCGAACCAAGTGGAAGTCAATCAGATCGTAAATCATCACTATCTAGCAATAGTCCGGACATACTAAGTGTTAATCAACTCTTACAATCGGTTTTGGAAACTGCACGACAAGTGGCAAGTGTCACCGTTTCCTCAACTCCTGTACCTTATGACCAAATGAAGAACCAGTGTGAAGCACTTGTAACAGGGAAACAACAGAAGATGTCGGTTCTTCACAGTTTCAAGCACCCGCAGGAGACTAGGGCAATAGTCCTTTCAAGTGAAAATGAAATGGAAGTTTCCCCTCTGCCAATTAAGACACTGGAGTATTCGGAAGGGGATCTGAAGTTGGTGAGCCAGGAGCAGTTTCCAGCGCAGTATCAAGTTCGCCTCTGTTCATATGACTTTGGACAGCAATATTCTTTGAAATTACCACCTGCAAGCCCCTTTGATAAATTCTTGAAAGCTGCTGGGTGCTAA 2961 0.4168 MGVMSRRVVPVCGNLCCICPALRASSRQPVKRYKKLLAEIFPRNQEAEPNDRKIGKLCDYASKNPLRIPKITDNLEQICYKDLRYETFGSVKVVLCIYRKFLSSCKEQMPLFAGSLLEIIRILLEQTRTDEIRILGCNTLLDFLDCQTDGTYMFNLEGFIPKLCQLAQEVGEDERALRLRSAGLQSLSYMVRFMGEHSHLSMDLDEIISVTLENYPNLQYNSRSALEDKLNSESLDLLVQGFPKVEDPLTDITKKDPLLLKASTETEMDSVLDTAKDPTYWSKICLYNMVKLAREATTLRRVLEPLFHYFDTESQWSADKGVAAHVLLYLQSLLAESGDNSCLLLSNLIKHLDHKNVAKQPILQINIINTTTKLAQNVKQQASVAILGAISDLIKHLRKCLQNSAEASSIGNDGSKLNTELQFALEMCILHLSNKVGDIGPILDLMAVMLENLSTTTLIARTTISAVYQTAKLITSIPNVSYHKKPFPDALFHQLLLAMAHPDHETRVGAHSVFSLVLMPSPFSPQSDHKTKMSQNVPSEIFSIQHESFLGAEQINGKRMEGKAAVGVSGKYAVHPYHGYIFSCALTDGKDELSSFRLSSHQVSLLLSSIWVQATSVDSGPANFEAMGHTYSIALLFTRSKTSSYTALVRCFQLAFSLMSLSLDQEGGLQPSRRRSLFTLASYMLIFSARAGNFLELIPKVKASLTKTTVDPFLELVDDVRLQAVYIESEKIIYGSQEDDVSAMKSLSAVKLDDKQLKETVISCFLTKFSKLSEDELSSIKKQLVQGFSPDDAYPLGPPLFMETPRESSPLAQIEFPDFDEIVAPVALIDEETRLEPSGSQSDRKSSLSSNSPDILSVNQLLQSVLETARQVASVTVSSTPVPYDQMKNQCEALVTGKQQKMSVLHSFKHPQETRAIVLSSENEMEVSPLPIKTLEYSEGDLKLVSQEQFPAQYQVRLCSYDFGQQYSLKLPPASPFDKFLKAAGC 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00529 986 PANTHER CYCLIN-LIKE PROTEIN 1 986 - -
Cca04g00529 986 SUPERFAMILY ARM repeat 62 719 IPR016024 -
Cca04g00529 986 PANTHER PUTATIVE, EXPRESSED-RELATED 1 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00529 Cca-Chr4 5166950 5178552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00529 K21842 - gmx:100817330 1739.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00332 10 3498264 3509951 Cca04g00529 04 5166950 5178552 PCT