Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00306 ATGGAACCTAAAACACAACCCCCAGGAAATGGTCCTCCACCTAAACCCTGGGAACAAGCAGGTTCCTCGTCTGGCCCCGCGCCTTTCAAACCGCCGTCAGCCGGCAACACGAGTGATGTAGTTGAGGCTTCAGGGACTGCAAAACCCGGAGAAATCGTTGCTAGCTCTGATAGGAATGCAACAACTGTTAATAGAAATTCTCTTGGGAGGCCTGTTCCCACAAGGCCATGGGAGCAGAATTATGGAAATAGCGGCTATGGAGGATATGGTTCTGCATTGAATTATAATTCCGGGTATGGATCTGGAATGTATGGATCTTCTTATGGTGGACTTGGAGGAGGAATGTATGGTGGGGGACTGTATGGAAACAGTATGTACAGGGGAGGATATGGTGGCATGTATGGCTCGTCTGGGATGTATGGAGGTGGAATGTATAACAGTGGCTTTGGCGGTCCAATGGGTGGTTATGGCATGGGTGGTGGCCCTTACGGAGATCAAGACCCCAATAATCCATATGGTGGCCCTCCCTCCCATCCTGGATTTTGGGTTTCTGCCCTACGTGTGATGCAAGGTGTGGTTAACTTTTTTGGTCGAATAGCAATACTCATAGACCAGAACACACAGGCTTTCCATATGTTCATGTCTGCCCTTCTCCAGCTGTTTGATCGCTCTGGTTTATTGTATGGAGAACTAGCTAGATTTGTGTTGCGGTTGCTTGGGATTAGAACTAAGCAGAGGAAGGTTGGTCCGCTAGGTCCGAATGGACAGCCACTGCCTGGACCACACAATTCTTCTGGAAATATAAACTACATTGAGGCACCAAAGGCTGCTCCAAGTGGTTCTTGGGACAACGTTTGGGGAAATGACCCCACTCAATGA 879 0.4892 MEPKTQPPGNGPPPKPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVASSDRNATTVNRNSLGRPVPTRPWEQNYGNSGYGGYGSALNYNSGYGSGMYGSSYGGLGGGMYGGGLYGNSMYRGGYGGMYGSSGMYGGGMYNSGFGGPMGGYGMGGGPYGDQDPNNPYGGPPSHPGFWVSALRVMQGVVNFFGRIAILIDQNTQAFHMFMSALLQLFDRSGLLYGELARFVLRLLGIRTKQRKVGPLGPNGQPLPGPHNSSGNINYIEAPKAAPSGSWDNVWGNDPTQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00306 292 MobiDBLite consensus disorder prediction 247 292 - -
Cca10g00306 292 PANTHER PEROXISOMAL MEMBRANE PROTEIN 13 7 289 - -
Cca10g00306 292 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX13 7 289 IPR035463 GO:0005777|GO:0016021|GO:0016560
Cca10g00306 292 MobiDBLite consensus disorder prediction 1 15 - -
Cca10g00306 292 MobiDBLite consensus disorder prediction 62 81 - -
Cca10g00306 292 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00306 Cca-Chr10 3236136 3239655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00306 K13344 - gmx:100775500 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00306 10 3236136 3239655 Cca04g00507 04 4952129 4955263 PCT