Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00507 ATGGAGCCATCAAATTCAGCTCCGCCAAAACCGTGGGAGAAagcagcagcaggatcaggaggagcagcaCCTTTCAAACCTCCATCAGCAGGTAGAACAAGTGATGTAGTTGAAGCTTCAGGGACTGCAAAACCTGGGGAAATAGTTTCTGCTTCTGATAAGACAGCACCTGTCAATAGGAATGTTCTTGGGAGACCCCTTCCCACAAGGCCATGGCAGCAGAATTATGGAAATAACAGCTATGGAGgttatggttctataatgaattataattctggatatggatatggtGGAATGGGAGGTTTGAATGGCGGTGGAATGTATGGTGGTGGAATGTATGGCAACAGTATGTACAGGGGAGGATATGGGGGGTTTTATGGCTCCTCTGGGATGTATGGTGGGGGAATGTATCGTGGCTTTGGTGGTCAAATGGGTGGTGATCCTTATGGAGCTGCAGATCCCAATAATCCGGACGGTGCTCCTCCATCGCCGCCAGGATTTTGGATTTCTTTTTTACGCTTGCTGCACGGCGTGGTTAACTTTTTCGGCCGGATTTCAATCCTCATTGACCAGAACACGCAGGCTTTTCATATGTTCATGACTGCACTTCTTCAACTTTTTGATCGCTCTGGTCTATTGTATGGAGAACTAGCAAGATTTGTCATGCGGTTGCTTGGAATCAAAACCAAGCCCAATAAAATTAACCCTCCAGATCCAGATGGAATTCCGCACAATTCCTCTGTAAATAAGAACCATATTGAGGGAACAAAGTGTGCTCCAAGGGATTATTGGGACAACGTATGGGGAAATGATGACAAGAAATGA 825 0.423 MEPSNSAPPKPWEKAAAGSGGAAPFKPPSAGRTSDVVEASGTAKPGEIVSASDKTAPVNRNVLGRPLPTRPWQQNYGNNSYGGYGSIMNYNSGYGYGGMGGLNGGGMYGGGMYGNSMYRGGYGGFYGSSGMYGGGMYRGFGGQMGGDPYGAADPNNPDGAPPSPPGFWISFLRLLHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGLLYGELARFVMRLLGIKTKPNKINPPDPDGIPHNSSVNKNHIEGTKCAPRDYWDNVWGNDDKK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00507 274 PANTHER PEROXISOMAL MEMBRANE PROTEIN 13 3 272 - -
Cca04g00507 274 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX13 3 272 IPR035463 GO:0005777|GO:0016021|GO:0016560
Cca04g00507 274 MobiDBLite consensus disorder prediction 1 71 - -
Cca04g00507 274 MobiDBLite consensus disorder prediction 232 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00507 Cca-Chr4 4952129 4955263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00507 K13344 - gmx:100820349 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00306 10 3236136 3239655 Cca04g00507 04 4952129 4955263 PCT