Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00263 ATGACCGACAGAGTCTACCCTTCcgccaagcccctccccaacgccaacgctgccgccaccgccaacccaTCTTTCCCGGCGACCAAGGCCCAGCTCTAcggcgccacccgccccacctaccgcccccagccccaccaccgtcgccggagccgccgcggctgctgctgcACCTTCTTCTTCTGGCTGACCCTCACCATCCTCGTCCTCCTCCTTCTGGCGGGTGTCGCCGGCACCGTCTTCTACCTCCTGTACCGCCCCCACCGCCCCTCCTTCACCGTCACCTCCCTGAAACTGTCGTACCTGAACCTCACATCCTCCTCCACCCTCAACTCCCGCTTCGACCTCGCCGTCTCCGCCACCAACCCCAACAAGAACATCCTCTTCGCCTACGACCCCACCGCCGTCACCGTCCTCTCCGGCGACGTCGACATCGGCGACGCCACCGTCCCCGCCTTCCGCCACCCGAAGAAGAACACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGACGCTGATCAAGACCTCCATGGTGGCCGCCGGGCACGCCCTCAGCGGCGACGAGGCCTCGACCCTGAAGGGCTCAATGAAGAGCAAGAAGGGTTTGGCTCTGAAGGTGAATTTGGAAACGAAGGTGAAGGCCACCATGGGGAAGTTGAAAACCCCCAAGATCTGGAAGTGGACCGTTTGAATTTCATCCACTTTACAGAACTTAGTGGTATTCCGGCGTACACTTGTTACTTGGATCTTGGCTTTTATACGAAGAGTGTAATTATGTTGACCCGAAATAAACAAGATTGA 1062 0.3531 MTDRVYPSAKPLPNANAAATANPSFPATKAQLYGATRPTYRPQPHHRRRSRRGCCCTFFFWLTLTILVLLLLAGVAGTVFYLLYRPHRPSFTVTSLKLSYLNLTSSSTLNSRFDLAVSATNPNKNILFAYDPTAVTVLSGDVDIGDATVPAFRHPKKNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDADQDLHGGRRARPQRRRGLDPEGLNEEQEGFGSEGEFGNEGEGHHGEVENPQDLEVDRLNFIHFTELSGIPAYTCYLDLGFYTKSVIMLTRNKQD 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00263 353 MobiDBLite consensus disorder prediction 296 310 - -
Cca10g00263 353 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 6 160 - -
Cca10g00263 353 MobiDBLite consensus disorder prediction 208 310 - -
Cca10g00263 353 MobiDBLite consensus disorder prediction 260 282 - -
Cca10g00263 353 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00263 Cca-Chr10 2871740 2873633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00263 29 159 EF-hand Containing Proteins AT5G21130 26.866 2.34e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00263 - - gmx:100819194 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00263 10 2871740 2873633 Cca11g00325 11 4236674 4237858 PCT