Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00261 ATGGCGTCCATTGGTGCACTCAAATTCTCTCTCTACTTACTTCTATGCCTCCTCGGCTATCCCTCCATTTCTCAAGGTAAGTATAACTGGAATGAAGGGTACCCATTTATTAGAAGAGCAAGCTCATCGGGGTCTTCACCAAAGAGTGGTTATGACTACATAATAGTGGGAGGAGGCACTGCAGGGTGTCCATTGGCTGCAACCCTGTCTCAGAAGTTCAATGTTCTGTTGCTTGAGAGAGGAGGAGTCCCTTTCAACAACCCCAATGTGTCATTTCTGCAGAACTTTCACATTACATTGGCAGACACTTCAGCAACTTCGGCTTCTCAATGCTTCATTTCAACAGATGGAGTCCTCAATGCAAGGGGAAGGGTTTTGGGAGGTGGAAGTTCCATCAACGCTGGCTTCTACACTAGAGCAAACCCAAGGTTTATAAGGAAGGTGGGGTGGGATATAAAGCTAGTGAATGAGTCATATCCTTGGGTTGAGAAGCAGGTTGTTCACCGGCCAAAGTTTTCAGATTGGCAGAGAGCAGTTAGGGACGGGCTTCTAGAAGCTGGAGTGTCTCCTTTTAATGGCTTCACATATGATCATAAGTATGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGTCGCCACACAGCTGCTGAACTGCTTGCTTCTGCGAATCCGAGCAAACTTACTGTTTTGATCCATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGTAAAAGACCAAAAGCTAAGGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCATTTCTTGGAACTGACAGGCAGAGTGAGGTGATTGTGTCTAGTGGGGCAATTGGAACTCCTCAATTGCTATTGCTCAGTGGAATTGGCCCCAAATCTGATCTTCAGAAATTGAACATCCCTGTGGTGCTTGACAACCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACAATTTTCATTCCTTCTAAGAGACCAGTTCAGCAGTCGCTCATAGAAACTGTTGGTATAACCAATTTGGGTGTGTACATCGAGACTAGTAGTGGGTTTGGCCAGTCCAAAGACAGCATTCACTGCCACCATGGTATCATGTCAGCTGAGATTGGACAGCTGTCCACTATTCCACCAAAGCAAAGATCACGAGAAGCTGTAGAGGCTTTTGTGAAGAGCAAGAGAGACATACCAGTTGAAGCATTCAAGGGAGGGTTCATTTTGTCAAAAGTTGCCGATCCATGGTCAACAGGTGAACTCAAGTTGAAAAACACCAACGTGGAGGACAACCCTGCTGTCACCTTCAACTACTTCAGTCACCCTTATGATCTTAAGCGCTGTGTGGAGGGGATTCGCTTGGCAATAAAGGTTGTCCAGTCAGAGCATGTCACCAACTACACTTTGTGTGACAAAGAAAATGCAGAGAAAATGCTTAACATCAGTGTGAAGGCTAATGTGAACCTCATTCCCAAGCACCCTAATGACACAAAATCACTAGAGCAGTTTTGTAGAGACTCTGTGATCACTATTTGGCACTACCATGGTGGGTGTCATGTGGGGAAGGTTGTAAACTCTGAGCATAAAGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTCACTGAGTCTCCAGGAACTAATCCTCAAGCTACTGTCATGATGATGGGCAGGTACATGGGGCTGAAGATTTTAAGGGATAGATTGGGGAAATTGGCTGGGCAGTTAAATTCTGTGACAGACACAATGGCGTCCATTGGAGCACTAAAATTGTGTGTCTTGTTAGTTGTATGCCTCCTCAAGTATGTAGGCCTTTCTGAGGGTCGATATGCAAAAGAAGAATACTCATTTATCAAAAGCGCAAGTTCATGGGGAAAGGGTGATTATGACTATATAATAGTGGGAGGAGGGGCAGCAGGGTGTGCATTGGCTGCAACCCTCTCTGAGAAGTACAATGTGCTGCTGCTTGAGAGAGGAGGAGTCCCTTTCAACAATCCCAATGTGACCTTTAAGTCAAACTTTCACATTGGATTGTTAGACAAAACGGTTTGTCATAACTTCATTTCAACAGACGGAGTCATCAATGGAAGGGCTAAAATTTTGGGAGGTGGAACTTCCATCAACGCTGGCTTCTACACTAGAGCAAACCCAGAATTTATAAGAAAATTGGAGTCACGGGGGTGGGACACAAAGCTAATGAACGAGTCATATCTTTGGATTGAGAAGCAGCTTGTTCACTGGCCAAAGTTTTCAGGTTGGCAGAGAGCAGTTAAGGACGCGCTTCTAGATGCTGGAGTGTCTCCTTTTAATGGCTTCACATATGAGCATTTGTATGGAACCAAAGTTGGTGGAACCACTTATGACAGCTCTGGCCGTCGCCACTCAGCTGCTGAACTACTTGCTTCTGCGAATCCGAGCAAACTTACTGTTTTGACCCATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGAAAAGCACCAAAAGCTAAGGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCATTTCTTGGAACTTACAGTCAGAGTGAGGTGATTGTGTCTAGTGGGGCTATTGGGAGTCCTCAATTGCTAATGATCAGTGGAATTGGCCCCAAATCTGATCTTCAGAAATTGAACATCCCTGTGGTGCTTGACAACCAATTTGTTGGGAAAGGCATGGCTGATAGCCCCATGAACACAATTCTTATTCCCTTCAAGAGACCAGTTGAGCAGTCACTCATAGAAGTTGCTGGTATAACAAAATTTGGTGTGTACATTGAGGCTACTAGTGGGTATGGCCAGACCAGAGACAGCATTCACTACCGCCATGGTACCTCGTCAGCTGAGGAAGAACAGCCGTCCACAACTCCACCAAAGCAAAGACCAGGAGAAGGTGTAGAACCTATTGTGAATAGCAACAAAGACGTACCATATGAAGAATTCATGGGAGGTTTCATATTGTCAAAAGTTGCCTACCCTATGTCAACAGGTGAGCTCAGGTTGGTAAACACGAACGTGGAGGACAACCCTACTGTCACCTTCAACTACTTAAGGCACCCTGATGATCTTAAGCGCTGTGTGGATGGGGTTCGCTTGGTAATAAAGGTTGGCCAATCAGAGCATATCACAAACTACACTTCGAGTGAAAGACAAAATGCAGATAAAATGCTTGAGCTCGGTCTGAAGGCTAATATCAACTTCATTCCCAAGCAACCCAATAACACAAAGTCACTAGAGCAGTATTGTCGAGACTCTGTGACCACTATTTGGCACTACTATGGTGGGTGCCGTGTGGAGCAGGTAGTGAACTCTGAGCATAAAGTTCTTGGTGTTGACGGACTCCGCATAGTAGATGGCTCAACATTTACTGAGTCTCCAGGAACTAATCCTCAGGCTACTGTCATGATGATGGGCAGGTACACGGCACTGAAGATTTTACAGAATAGGTTGGGGAATAAGGCCGGTATTTAA 3504 0.4512 MASIGALKFSLYLLLCLLGYPSISQGKYNWNEGYPFIRRASSSGSSPKSGYDYIIVGGGTAGCPLAATLSQKFNVLLLERGGVPFNNPNVSFLQNFHITLADTSATSASQCFISTDGVLNARGRVLGGGSSINAGFYTRANPRFIRKVGWDIKLVNESYPWVEKQVVHRPKFSDWQRAVRDGLLEAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASANPSKLTVLIHATVQKIVFDTTGKRPKAKGVIFKDENGKQHEAFLGTDRQSEVIVSSGAIGTPQLLLLSGIGPKSDLQKLNIPVVLDNQFVGKGMADNPMNTIFIPSKRPVQQSLIETVGITNLGVYIETSSGFGQSKDSIHCHHGIMSAEIGQLSTIPPKQRSREAVEAFVKSKRDIPVEAFKGGFILSKVADPWSTGELKLKNTNVEDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQSEHVTNYTLCDKENAEKMLNISVKANVNLIPKHPNDTKSLEQFCRDSVITIWHYHGGCHVGKVVNSEHKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLGKLAGQLNSVTDTMASIGALKLCVLLVVCLLKYVGLSEGRYAKEEYSFIKSASSWGKGDYDYIIVGGGAAGCALAATLSEKYNVLLLERGGVPFNNPNVTFKSNFHIGLLDKTVCHNFISTDGVINGRAKILGGGTSINAGFYTRANPEFIRKLESRGWDTKLMNESYLWIEKQLVHWPKFSGWQRAVKDALLDAGVSPFNGFTYEHLYGTKVGGTTYDSSGRRHSAAELLASANPSKLTVLTHATVQKIVFDTTGKAPKAKGVIFKDENGKQHEAFLGTYSQSEVIVSSGAIGSPQLLMISGIGPKSDLQKLNIPVVLDNQFVGKGMADSPMNTILIPFKRPVEQSLIEVAGITKFGVYIEATSGYGQTRDSIHYRHGTSSAEEEQPSTTPPKQRPGEGVEPIVNSNKDVPYEEFMGGFILSKVAYPMSTGELRLVNTNVEDNPTVTFNYLRHPDDLKRCVDGVRLVIKVGQSEHITNYTSSERQNADKMLELGLKANINFIPKQPNNTKSLEQYCRDSVTTIWHYYGGCRVEQVVNSEHKVLGVDGLRIVDGSTFTESPGTNPQATVMMMGRYTALKILQNRLGNKAGI 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00261 1167 PANTHER PROTEIN HOTHEAD 599 1166 IPR031206 -
Cca10g00261 1167 Gene3D - 168 514 - -
Cca10g00261 1167 PANTHER OSJNBA0019K04.7 PROTEIN 12 580 - -
Cca10g00261 1167 Gene3D - 753 1099 - -
Cca10g00261 1167 ProSitePatterns GMC oxidoreductases signature 2. 867 881 IPR000172 GO:0016614|GO:0050660
Cca10g00261 1167 PANTHER PROTEIN HOTHEAD 12 580 IPR031206 -
Cca10g00261 1167 Pfam GMC oxidoreductase 636 908 IPR000172 GO:0016614|GO:0050660
Cca10g00261 1167 Pfam GMC oxidoreductase 51 323 IPR000172 GO:0016614|GO:0050660
Cca10g00261 1167 PANTHER OSJNBA0019K04.7 PROTEIN 599 1166 - -
Cca10g00261 1167 Pfam GMC oxidoreductase 419 565 IPR007867 GO:0016614
Cca10g00261 1167 Pfam GMC oxidoreductase 1004 1150 IPR007867 GO:0016614
Cca10g00261 1167 Gene3D - 51 564 IPR036188 -
Cca10g00261 1167 SUPERFAMILY FAD-linked reductases, C-terminal domain 319 521 - -
Cca10g00261 1167 ProSitePatterns GMC oxidoreductases signature 2. 282 296 IPR000172 GO:0016614|GO:0050660
Cca10g00261 1167 SUPERFAMILY FAD-linked reductases, C-terminal domain 904 1106 - -
Cca10g00261 1167 Gene3D - 636 1149 IPR036188 -
Cca10g00261 1167 SUPERFAMILY FAD/NAD(P)-binding domain 633 1159 IPR036188 -
Cca10g00261 1167 SUPERFAMILY FAD/NAD(P)-binding domain 48 575 IPR036188 -
Cca10g00261 1167 MobiDBLite consensus disorder prediction 947 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00261 Cca-Chr10 2841898 2852184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00261 34 577 Miscellaneous Gene Families AT3G56060 51.730 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00261 K15403 - gmx:100818122 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00261 10 2841898 2852184 Cca11g00323 11 4200905 4208903 PCT