Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00094 ATGttctcttccttttttctttggcttctactcttcttctcttcATTATTTTCTTATGGTTTAGGAGATAAAGCATTTTCAGGAACATACGGAGTGAACTATGGTAGGATAGCAGACAACCTACCTTCCCCAGAAAGTGTGGTTACTCTACTCAAAGCAGCAAAAATTAAAAACATTAGGATATATGATGTTGATCATCAAGTCCTTCGTGCCTTCAAAGGTTCTGGAATTGAAATTGTGGTTGGACTTGGCAATGAATTTCTCAAGGACATGAGTGTGGGGGAAGATAGAGCCATGAGTTGGGTCAAAGAAAATGTTCAACCCTTTCTTCCAGGGACCAAAATTCGTGGCATTGCAGTGGGAAATGAAATCTTGGGAGGCACAGATATGGAACTTTGGCAAGTTTTGCTTCCTGCAGCAAAGAATGTTTATAATGCACTTACTAAGCTTGGTCTAGCAAAAAATGTTCAAGTGTCAAGTCCACATTCTGAAGCTGTATTTGCTAATTCTTTTCCTCCTTCCTCATGCACTTTTAAGGAAGATGTTCTTCCATATATGAAGCCTCTCCTACAATTCTTCTCACAAATCGGTACCCCTTTTTTCATAAATGCATATCCCTTCCTTGCATATAAAAATGATCCACAACATATTGACCTTAACTATGCCCTCTTTTTGAAAAATCCTGGGATTTATGATGCAAAGACTAAGTTGTATTATAGTAACATGTTTGAGGCTCAGGTTGATGCAGCTTATGCTGCATTGGAGAAGGTTGGTTTTGACAAGATGGAGGTTATTGTTTCTGAGACTGGTTGGGCTTCTCACGGGGATGAGAGTGAGGCTGGTGCAACAATAAAGAATGCAAGGACCTACAATCGTAATTTGCGCAAGAGGTTACTCAAGAAGAAAGGAACCCCTTATAGGCCCAAAAAAGTGGTGAGGGCTTATGTCTTTGCCTTGTTTAATGAGAATTTGAAGCCCGGCCCAACATCTGAGAGAAACTTTGGATTGTTTAAGGCTGATGGAAGCATTTCATATGATATTGGCTTCACTGGGCTTGTACCCTCTTCGGCAACTTCATCTTTCCTTTCCTTTAAGGGTATTGGATCCTCGTCAATGGTGATGGCTTTTACAAGCTTTGCAGCTTTTCTTTTTGTAGCATTGTAA 1164 0.3875 MFSSFFLWLLLFFSSLFSYGLGDKAFSGTYGVNYGRIADNLPSPESVVTLLKAAKIKNIRIYDVDHQVLRAFKGSGIEIVVGLGNEFLKDMSVGEDRAMSWVKENVQPFLPGTKIRGIAVGNEILGGTDMELWQVLLPAAKNVYNALTKLGLAKNVQVSSPHSEAVFANSFPPSSCTFKEDVLPYMKPLLQFFSQIGTPFFINAYPFLAYKNDPQHIDLNYALFLKNPGIYDAKTKLYYSNMFEAQVDAAYAALEKVGFDKMEVIVSETGWASHGDESEAGATIKNARTYNRNLRKRLLKKKGTPYRPKKVVRAYVFALFNENLKPGPTSERNFGLFKADGSISYDIGFTGLVPSSATSSFLSFKGIGSSSMVMAFTSFAAFLFVAL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00094 387 Gene3D Glycosidases 29 352 - -
Cca10g00094 387 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 379 IPR044965 GO:0004553|GO:0005975
Cca10g00094 387 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 5 379 - -
Cca10g00094 387 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
Cca10g00094 387 Pfam Glycosyl hydrolases family 17 31 349 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00094 Cca-Chr10 996308 998644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00094 25 358 Glycoside Hydrolase AT3G15800 76.716 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00094 - - gmx:100815468 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00094 10 996308 998644 Cca10g00094 10 996308 998644 ECH
Cca10g00094 10 996308 998644 Cca11g00152 11 1888350 1890300 PCT