Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02812 ATGACACTCACATTCCCTCCTCCAAGATCACCATTCTTCAACACCCTTTTGTTCCTCTTCACTCTCCTCCCTTGCTACCTATCTCTCCCTGACCCTGATGCAGCAGCAGCAACAGTTCAGCCAATCATTCCAAATCCATCTTCAACAATCCCTGCATTCCCGGAACAAGCTGATGTTGAAGGCTGCCCTCTTAACCTCTCAGATGAGCACTATGAAGGGATAAAAAGAGCATGTGGCTCCAACAAAGATGCTGCAGATACGGAACTCCACCGTAGTAGATGCTGTCCTGTGCTGGCTGCATGGCTCTACTCAGCATACTCAGTCACTGCCCTTAGTGGTGGAATGCAACGTGAACATGCCACATCCTATGACATGCCTTTACTTCCTGATGATTCTGAAACGTGTGTGAGTGACTTGAGGAAGGCCTTGAAAGTTAGAGGAATTAACCTTGTTCAGCCCAATGAGACTTGTGATGTGGTCTATTGCTACTGTGGCATTAGGTTGCACCCTTTGACATGTTCCGAGTCTTTTTCAGCTACTCCAAGTGGGAAAATTGTTGTGGATGAAAGTGTGAAGAGATTGGAGAGGAATTGCTTGAGTAGCAGCACCAATGTTAATAAGTTTCCTGGGTTGGGAGGATGCTCCAAGTGCTTGCATAGTCTCTATTCTCTTAGAAAGAAGTCTTCAAATTCAAGCAAGTCAGAAAATAGGACCACCAAGATCCATAACAAAGACTGTGAACTCATGGGCCTAACATGGCTTCTGGCTAAGAATAGAACGGCTTACATTCACACAGTTTCTGGTGTTCTTCGTGCTTTGATGTTGAGCACTGAAGGCTCTGACCCACAATCATGCACTCTAAACAGTGATGGAATGCCTCTTGCCGTTGATTCCTCTGAAATGTTAGATCAATCTTCATCAACCAACCTCCAAGCACTTTCTTTGTTATTTCTATATTTGCTACTAGGAGTTCATTTCACTGTATTATTATCATCCACCTAA 1002 0.4441 MTLTFPPPRSPFFNTLLFLFTLLPCYLSLPDPDAAAATVQPIIPNPSSTIPAFPEQADVEGCPLNLSDEHYEGIKRACGSNKDAADTELHRSRCCPVLAAWLYSAYSVTALSGGMQREHATSYDMPLLPDDSETCVSDLRKALKVRGINLVQPNETCDVVYCYCGIRLHPLTCSESFSATPSGKIVVDESVKRLERNCLSSSTNVNKFPGLGGCSKCLHSLYSLRKKSSNSSKSENRTTKIHNKDCELMGLTWLLAKNRTAYIHTVSGVLRALMLSTEGSDPQSCTLNSDGMPLAVDSSEMLDQSSSTNLQALSLLFLYLLLGVHFTVLLSST 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02812 333 PANTHER GPI-ANCHORED PROTEIN 1 329 IPR040376 -
Cca09g02812 333 Pfam SPARK 60 238 IPR043891 -
Cca09g02812 333 PANTHER PROTEIN, PUTATIVE-RELATED 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02812 Cca-Chr9 53721924 53724826 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02812 - - vun:114179502 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02812 09 53721924 53724826 Cca09g02812 09 53721924 53724826 ECH
Cca09g02812 09 53721924 53724826 Cca08g00286 08 4137863 4140498 PCT