Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02791 ATGAAAATAACTCGATTCGGTGCTATGCGACTAAGATCTTCACAAAGATACATGGCTCAAGACAAGTCAATTCACGATGGCTCCAGTGATCGAGGGAAGGCAGTGCTGCCAATGATCAAGAGCATCAATCCCGATAATAGTAATGTCACCACAACAAAAGTCCCAAATGCTCACAAATCGAAAGGAAGGCTAATGCAAAATTCACACAAGAATCACAAGTCAGAAACATATGATGACTTGAAATCAGATTTCTCTCGTGAAATTTTCAGTTCCTTGGAAAGTTATCTCCCAACTGACATGCTCACCATCTCTCGTGCTGAAAAGGTTAAGTACATGAGCAACATTTTGCTCGATTATTTGCCACCAGGAATGCGAAATAGAGTTGAAAATTTTGAGAAATGGGTTAATCAAACAAATTTTCAAGTTATTCGTCCCAATACAATGAATAAGTATGGTGCTGTACTCGATGACTTTGGCCTTCAAACCATGCTTAACAAGCTTATGGAAAGTTTTATTTGTCCTTTGTCTAAAGTTTTCTATTCAGAAATTGGTGGATCAACTCTGGATTCTCATCATGGGTTTGTTGTTGAATATGGTAAAAATAAAGACACTGACTTAGGTTTCCATGTTGATGACTCAGAGGTAACCTTGAATGTTTGCTTGGGTAAACAATTTTCTGGAGGAGAATTATTTTTTCGCGGCATGCGGAAACCTTTGACTATTTCCATGTCCCTGGACGAGCTGTGCTTCATCATGGACGTCACCGCCATGGTGCTAGAGCTACAACATCAGGCATTGTCCAAGAAGGAAGGCAAACAAATTACTTTATCTATTGGTGATAAGCCTAAAGACAAAAGAACTACATCATCATCTGTTGGTGATAAGCGGAAAGGCAAACAAATTGCAGCATCTGTTGGTGATAAGTGTAAAGTCAAGAAAACTGCATCTATTAGTGATAAGTGGAAAGGCAAACAAATTTCATTATCTGATGATGGTGATAAGTGGAAGTGGGGGCTCAAAAAATAA 1026 0.3879 MKITRFGAMRLRSSQRYMAQDKSIHDGSSDRGKAVLPMIKSINPDNSNVTTTKVPNAHKSKGRLMQNSHKNHKSETYDDLKSDFSREIFSSLESYLPTDMLTISRAEKVKYMSNILLDYLPPGMRNRVENFEKWVNQTNFQVIRPNTMNKYGAVLDDFGLQTMLNKLMESFICPLSKVFYSEIGGSTLDSHHGFVVEYGKNKDTDLGFHVDDSEVTLNVCLGKQFSGGELFFRGMRKPLTISMSLDELCFIMDVTAMVLELQHQALSKKEGKQITLSIGDKPKDKRTTSSSVGDKRKGKQIAASVGDKCKVKKTASISDKWKGKQISLSDDGDKWKWGLKK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02791 341 MobiDBLite consensus disorder prediction 279 306 - -
Cca09g02791 341 MobiDBLite consensus disorder prediction 279 293 - -
Cca09g02791 341 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 46 128 - -
Cca09g02791 341 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 126 237 - -
Cca09g02791 341 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 46 128 - -
Cca09g02791 341 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 126 237 - -
Cca09g02791 341 SMART p4hc 107 262 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02791 Cca-Chr9 53546401 53552613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02791 - - pvu:PHAVU_002G326100g 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00278 08 3924099 3934771 Cca09g02791 09 53546401 53552613 ECH
Cca09g02791 09 53546401 53552613 Cca09g02791 09 53546401 53552613 ECH
Cca09g02791 09 53546401 53552613 Cca08g00278 08 3924099 3934771 PCT