Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02702 ATGCTGCTATGTCCCAAAGAAGAAGCACTTGTTAAACTCTTCTACAATGTCTCAACCCCTTTTCAGCTTCTCTTCCTTATTCTCTTCTCCTCTGCCATTTTTCTTGTCACCTTCTTAACCTTCACTGGCAGATTTCCCTTAATCCAAAGGGATGATCAACAATATGAATACGTGTATACTGAGGATGAGGAAGAAGAAGAAACTCAAGAAGGGTATTCTTGTGTGGATTCTTCTGAGGGAGAAAACATCACCTGTGGTAGGGAAAATCTTGTGTTTCTGCACAACGAGGAGACTCATTCTTATTCTGAAGAATTCATAAGCCCCGAGGAGAGCTTGAATGAAGAGTCAGAAGAAAAGCGTTATTCTGAAACTTCGTCTCTCCATAACTCCCCACAAGTTTCAGACTTCGAAAGTGAAGAGGCAGAAACGGTTGGACAAGACTTTCCAGCAAGAGATGCTGATTCTGTTCTTAATTCTGCCCAAGTTGAAAGCAGGACCACCTCCCCCATCAACCTCAACGCCTACAAAAGAAACAAAAACCGTGACGACGATCATGTTAGCGTTGAAATTATTAAAAATAAGAAGGTGCAAGAGGCAAACCTCGGAAGGGATGAGAGATTCTTTGTGTTTGCTTCAACACAGTTGCATAGCAAGAAGTTAATGGTTGAAGAGAAGGATGATGAGTCCTCTAAGTGGAGGAGCTCCATCAATTGCAGGGATTCCGAGACTGAAAATGACGCATTTTCTTCCTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACGTTGTTCCAAAAATATGATGAAGAAATGGCAATCTTAGACAGAATTAGTGCACAGAAACTTCATGAAACTGAGTCGTTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTCCAAACTACGAATAAAAAAGCCGCTGATGTTGGCCACAATCCATATCGTGAACTAGAAGCTGCATATGTTGCACAAATTTGCTTAACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGATCATGATACCGGTTGTTCTGCCACCATTGCGCAGCAATTCCAGCAATTTCAGGTTTTGTTACAGCGATACATTGAGAACGAGCCTTTTGAGCATGGCAGGAGACCTGAGATCTATGCTAGAATGAGGCTTTTGGCACCAAAATTGCTCCTAGTGCCAGAATATCAAGATTTAGAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTAAAGATTATGGAGGACGGGATCAAGACATTCATGAATTTTCTAAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTCAGGAGAAACCAAAGAGGCACGGTTGATCCAACACTACTCAGACTAATGAAGAAGGTTAATCAAAAGAAGAGGGTGAAGGTTAAGGATCTCAGCCATCCAGGCACATGCTTGAGGAAGAGAAAGATAAAGGTGGAAAAGAATATGGATATTTTGATGGCTCTCATAGACCTAAAAGTGGTGTCAAGGGTTTTAAGAATGAATGACTTGAGTGAAGAGCAATTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAAAGAGATTATTCCACCCCACTATTCTTCCCCTCACATTAA 1698 0.417 MLLCPKEEALVKLFYNVSTPFQLLFLILFSSAIFLVTFLTFTGRFPLIQRDDQQYEYVYTEDEEEEETQEGYSCVDSSEGENITCGRENLVFLHNEETHSYSEEFISPEESLNEESEEKRYSETSSLHNSPQVSDFESEEAETVGQDFPARDADSVLNSAQVESRTTSPINLNAYKRNKNRDDDHVSVEIIKNKKVQEANLGRDERFFVFASTQLHSKKLMVEEKDDESSKWRSSINCRDSETENDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQTTNKKAADVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDHDTGCSATIAQQFQQFQVLLQRYIENEPFEHGRRPEIYARMRLLAPKLLLVPEYQDLEEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLRLMKKVNQKKRVKVKDLSHPGTCLRKRKIKVEKNMDILMALIDLKVVSRVLRMNDLSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02702 565 MobiDBLite consensus disorder prediction 125 139 - -
Cca09g02702 565 Pfam Protein of unknown function (DUF1666) 324 563 IPR012870 -
Cca09g02702 565 MobiDBLite consensus disorder prediction 101 178 - -
Cca09g02702 565 MobiDBLite consensus disorder prediction 157 175 - -
Cca09g02702 565 PANTHER DNA LIGASE (DUF1666)-RELATED 4 565 - -
Cca09g02702 565 PANTHER DUF1666 FAMILY PROTEIN 4 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02702 Cca-Chr9 52698347 52701502 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02702 - - gmx:100776190 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02702 09 52698347 52701502 Cca09g02702 09 52698347 52701502 ECH
Cca09g02702 09 52698347 52701502 Cca08g00227 08 3178661 3183326 PCT