Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02696 ATGGCTCCGAAACTCGTGAAAACGGGGTCGTTCCGTCACGGTTTGGCGGAGAAGAAGGAGAAACTTCTCTCGGCGAAGAGTGTTGGCGAAATTGGCATGCAAGAGGAAGAAGAGTGGAGGGTGGTGAAGTGGTGGAACACGGTGAAGAACCTGACGGAGAAGGCATGGGAAATGGGTCGTTCTGATCCAAGGAAGATTATTTTCTCCGCAAAATTGGGACTTGCTATGACCCTTATTTCCCTTTTGATTCTCATCAAAGAACCCTTCGAGGATATGAGTCGCTATTGTGTCTGGGCCATTCTAACGGTTGTCGTAGTCTTTGAGTTCAGCATAGGGGCAACACTGAGCAAGGGGTTGAGCAATGGATTAGGGACCTTGACGGCAGGAGGACTTGCTGTGGGGATGGCAGAGTTATCAGCATTGGGTGGAAAATGGGAGGAACTTATAATTATTATAAGCATCTTTGTTGTAGGATTTTGTGTCACCTATACAAAACTATACCCTACCTTCAAGAATTATGAATACGGGTTCCGCGTGTTCTTGATCACGTATTGTTTCATCACAGTATCCGGGTATCAAACAGGGGAATTTTTTGATACAACTATAAACAGATTTTTTCTCATTGCACTTGGTGCTGCTGTATCTTTGGGAGTCAACGTCTGTATATACCCAATTTGGGCTGGTGAGGATCTGCATAATCTTGTCACACAAAATTTCATGGGTGTTGCCACATCTTTGGAAGGTGTCGTGAATCACTACCTTCATTGTGTTGAATATAAGAAGGTGCCATCTAAAATTCTTACTTATCAAGCTTCTGATGACCCGGTGTACACTGGCTACAGATCGGTTGTTGAATCTACAAGTAAAGAAGATTCATTGTTGGGGTTTGCTGTCTGGGAACCACCACATGGTGATTACAAAATACTGAAATATCCATGGAAGAATTATGTGAAATTAAGTGGGGCTCTAAGGCATTGTGCATTTACGGTCGTGGCTATGCATGGATGCATACTTTCTGAGATACAGGCCCCAGCAGAGATGAGACAAGTTTTGCGCAGTGAACTTCAGAGGGTAGGTTCTGAAGGGGCAAAAGTGTTACGTGAACTTGGCAACAAGGTTAAAAAGATGGAGAAACTAGACGAGGGAGACTTGCTGTATGAAGTGCACGAGGCAGCCGAGGAATTGCAACAAAAGATTGATAAAAAGTCTTACCTTCTTGTCAATTCAGAGTGCTGGGAAATTGGAAACCGCCCCAGAGAAGAGGAGAGTGATCCTCAACAACAACAAGGCCTATTTAACATGGATGCAGAAAGAAAATTTCTTGAGTACAAGTCTCTTAGTGAAGCAGTACTTGATCTCAGAACAGTTGAAGTTCCAAATACTGGGGAAGGAAACATAGCTCAAAGCAATAACTCAAGCGTGCATGCAACCAATGCCTCTCAAAACATGTTCAGGAGACAGATATCTTTGCCTTCTAATATTTACCACAAATCAACTAACGTGCCCAAAGAGGGTCGTGAATCAAAAACTTATGAAAGTGCTAGTGCACTATCTCTAACAACATTTACGTCGCTTTTGATTGAATTTGTAGCAAGGCTTCAAAACCTGGTGGATTCGTTTGAGGAATTAGGTGAAATAGCAAACTTTGGTGACCCACTTGAGGAACGAGCACCCGCATCATGTTGTGGGTTTTTGGACCAGGCTGTTTAA 1710 0.4333 MAPKLVKTGSFRHGLAEKKEKLLSAKSVGEIGMQEEEEWRVVKWWNTVKNLTEKAWEMGRSDPRKIIFSAKLGLAMTLISLLILIKEPFEDMSRYCVWAILTVVVVFEFSIGATLSKGLSNGLGTLTAGGLAVGMAELSALGGKWEELIIIISIFVVGFCVTYTKLYPTFKNYEYGFRVFLITYCFITVSGYQTGEFFDTTINRFFLIALGAAVSLGVNVCIYPIWAGEDLHNLVTQNFMGVATSLEGVVNHYLHCVEYKKVPSKILTYQASDDPVYTGYRSVVESTSKEDSLLGFAVWEPPHGDYKILKYPWKNYVKLSGALRHCAFTVVAMHGCILSEIQAPAEMRQVLRSELQRVGSEGAKVLRELGNKVKKMEKLDEGDLLYEVHEAAEELQQKIDKKSYLLVNSECWEIGNRPREEESDPQQQQGLFNMDAERKFLEYKSLSEAVLDLRTVEVPNTGEGNIAQSNNSSVHATNASQNMFRRQISLPSNIYHKSTNVPKEGRESKTYESASALSLTTFTSLLIEFVARLQNLVDSFEELGEIANFGDPLEERAPASCCGFLDQAV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02696 569 Pfam Aluminium activated malate transporter 56 544 IPR020966 GO:0015743
Cca09g02696 569 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 565 - -
Cca09g02696 569 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02696 Cca-Chr9 52605905 52619297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02696 7 552 Miscellaneous Gene Families AT3G18440 59.828 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02696 - - gmx:100777792 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00211 08 2924041 2930463 Cca09g02696 09 52605905 52619297 ECH
Cca09g02696 09 52605905 52619297 Cca09g02696 09 52605905 52619297 ECH
Cca09g02696 09 52605905 52619297 Cca08g00211 08 2924041 2930463 PCT