Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02690 ATGGAATCAAACTTCCTTCATTTGGCATTTGGCAGCATGCAACGTTTTGTCGACCATGTTCTCGCCGTTACCAAAGAGTCGGTGAAGACGTTAACTTACGAGTCCTTGAACAACTTCGTCAGATTCATCAATGGCGTCTCCGCTCTTCTCTTGACACTGCTGCCTGGAAATGCTACTATCCTTGAAGGTATTCACGGTTGGGAGCTCAGGCCAACTTTTCGTGCTCCACGCCTTCCACGTTGGATGGAAAATGGCGTTTCCTCTTTCAACCACTTTGTTCACCAGCTTTCTCTCGATTCCGATGTTTCCAGCCTCGATTATTCATCTGCAGATGAAGACACTGATGCCTACGATGAATATGCTGATTCTCCCTCTTCTCAAAACTCCAGAACCTCCACATCTAGTTTTTCTGATTATGGTAGGCATCGTCACATCAATTGCTTCCGCTATATCCTTCTTTGGATTTTGCTTCCGATACAGTTTTTGCTGCGGATTCCATTTCGCCTTTTCCACTTAGCTTATTCTGCAGTGTCAAAGCCACCAGCTATATCTGCCAATCAACACCCTTCAAATTCACATTCACATTATAATAGAATGCAAAGCCTCAAGGACCACATGATCCATCGTGCTACTGATAGGAGACGTGGGGTCGTAGAGGATCTTCATATGGCTATGGAGATATTTATAGAAGCTGTTTTTGATGTTGTGCACAATGCAGTGCATCTTCTTCTTTCCCCATCAGAAGCTTTAGGAAAATTATTCAGGTTGTTTTCATCTCATGAAAGAGGCATTGTAAGTGATCAAGTTGTTGGGGATGCCACTGTTTCCTCATCTACACTTGGAGAGAATGATCCGACACCTAGAGAGAGGAATACCAGTTTTCGGCAACCTCTGAACACGGACGCCCGGACATGTCAAGATGTCATAACGGAGCTAGGGTATCCGTTTGAAGCTATTCATGTGATCACTAAGGATGGATATGTTCTTCTTTTAGAAAGAATTCCTAGGCGAGATGCAAGTAAAGCTGTTTTTCTTCAGCATGGAGTCTTTGATTCATCAATGGGTTGGGTATCTAATGGTATTGTTGGCTCTCCCGCTTTTGCAGCCTATGATCAAGGGTATGATGTATTTCTGGGAAACTTTCGTGGTTTGGTTTCTAGGGAACATGTCAACAAGAACATCTCGTCTCGTGCATACTGGCAGTACTCCATCAACGAACATGGGACTGAGGATATTCCTGCTCTGATAGAGAAAATTCATCAAGTAAAAACTGCTGAATTGAAGCTAAGCAAGCCTGGTGTTGAGGAGGAAAGTAATGGTGATCAGCTTTACAAGCTTTGTGCAATTTGCCATAGTTTGGGAGGAGCTTCTATGATAATGTATGTTGTTACACGTAGAATAGAAGCGAAGCCCCATAGACTTTCAAGATTGGTTTTGTTATCACCTGCTGGATTTCATCACGACTCTAACCTAGTCTTTTCTGTGGTGGAGCATGTATTATTTTTGCTGGCCCCTATTTTGTCTCGTATTTTCCCAGCCTTCTATATACCAACCAGGTTTTTCCGTATGCTTGTTAACAAGTTAGCTCGAGACCTGCAGAACCTGCCTGCAGTTGGAGGATTGGTTCAAACTTTAGTAGGTTATGTTGTTGGTGGGGACAGCTCAAATTGGGTTGGAGTTTTAGGATTACCACATTACAACATGAATGACATGCCAGGAGTATCTTTTGGTGTTGCTCTCCATCTTGCACAGATAAAGCGTACTAGAAGATTTAGAATGTTTGATTATGGGAGTGCTTATGCTAATGTCAGAGAGTATGGTTCCCCTGAGCCTTTGGATTTGGGTGAACACTATGGACTCATCAACATTCCTGTTGATCTGGTTGCTGGTCAAAAAGACAGAGTGATACGACCTTCAATGGTAAAGAGACACTATAAATTGATGAAGGATGCAGGTGTGCATGCGTCATATAATGAGTATGAATATGCTCATTTGGACTTTACCTTCTCTCACCGTGAAGAACTTTTGTCATATGTTATGTCACGTTTGCTACTTGTGGAACCCAATTCAAAGAATCAAGTTAATCAAAGGGCTGCAAGATGGAGGAAGAAAGGACAGGTTTGA 2124 0.4266 MESNFLHLAFGSMQRFVDHVLAVTKESVKTLTYESLNNFVRFINGVSALLLTLLPGNATILEGIHGWELRPTFRAPRLPRWMENGVSSFNHFVHQLSLDSDVSSLDYSSADEDTDAYDEYADSPSSQNSRTSTSSFSDYGRHRHINCFRYILLWILLPIQFLLRIPFRLFHLAYSAVSKPPAISANQHPSNSHSHYNRMQSLKDHMIHRATDRRRGVVEDLHMAMEIFIEAVFDVVHNAVHLLLSPSEALGKLFRLFSSHERGIVSDQVVGDATVSSSTLGENDPTPRERNTSFRQPLNTDARTCQDVITELGYPFEAIHVITKDGYVLLLERIPRRDASKAVFLQHGVFDSSMGWVSNGIVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRAYWQYSINEHGTEDIPALIEKIHQVKTAELKLSKPGVEEESNGDQLYKLCAICHSLGGASMIMYVVTRRIEAKPHRLSRLVLLSPAGFHHDSNLVFSVVEHVLFLLAPILSRIFPAFYIPTRFFRMLVNKLARDLQNLPAVGGLVQTLVGYVVGGDSSNWVGVLGLPHYNMNDMPGVSFGVALHLAQIKRTRRFRMFDYGSAYANVREYGSPEPLDLGEHYGLINIPVDLVAGQKDRVIRPSMVKRHYKLMKDAGVHASYNEYEYAHLDFTFSHREELLSYVMSRLLLVEPNSKNQVNQRAARWRKKGQV 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02690 707 MobiDBLite consensus disorder prediction 120 137 - -
Cca09g02690 707 SUPERFAMILY alpha/beta-Hydrolases 303 680 IPR029058 -
Cca09g02690 707 MobiDBLite consensus disorder prediction 275 296 - -
Cca09g02690 707 Gene3D alpha/beta hydrolase 294 684 IPR029058 -
Cca09g02690 707 PANTHER LYSOSOMAL ACID LIPASE-RELATED 20 692 - -
Cca09g02690 707 MobiDBLite consensus disorder prediction 116 137 - -
Cca09g02690 707 Pfam Partial alpha/beta-hydrolase lipase region 306 360 IPR006693 GO:0006629
Cca09g02690 707 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 20 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02690 Cca-Chr9 52536233 52540117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02690 13 695 Lipid Metabolism Gene Families AT1G18460 65.066 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02690 - - gmx:100779931 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02690 09 52536233 52540117 Cca09g02690 09 52536233 52540117 ECH
Cca09g02690 09 52536233 52540117 Cca08g00195 08 2718012 2723774 PCT