Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00195 ATGATGCAACGATGCGTTGATCATGTTCTTGCTGTTACTAAAGAGTCATTGAAGGCAATTACTTATGAGTCCTTAAACAATATTGTGAGGCTAATCAACGGAGTATCAGCCCTTTTGTTGGCATTACTACCTGGGAAAGCTAATATACTTGAAGGTATCCATGGTTGGGAACTCAGGCCAACTTTCCGTGGACCGCGATTTCCACGGTGGATGGAGAATGGCGTATCGTCTTTCAACCAGTTTATCCATGAACTTTCTGTGGATTCTGATAATTCAAGCCCTGAATACTCATCCGGAGATGAAGATAGTGATAAATATAGTGATAGATACGATTACCCTCCATCTCCTGCATCTCAGAGTTCTAGAACCTCAGAAGCTGGTTTTACCAAATACAGTAGGCATCAGATGGATTGGATCCAGTATATCTTGCTTTTGATTTTGTTTCCTTTAAAATTATTGCTGTGGATTCCACTTCATCTTTTACAGTTAGTTTATTATGGGGTGTTAAAATCCTTGTCTATTTCTGGAAATAAGCGGCCTCCACATTTACATGCGCATAAGAGGGTGCTAAGCCTCAAAGAACATATTATCCACCGTACTACTGATAGGAGACGTGGAGTTGTAGAGGATCTTTATCAAGGCATAGAACTATCTATAGAAGCTGTCTTTGATGTTGTTCACAAGGCAGCACATCTTCTTCTCTCCCCTTCAGAAGCTTTTGGGAAATTATTCAGATTGTTTTCGTCTCATGAAGGCAGTAGCTCTAAAGAAGATCGTGATAGTGTTGAGGACACCTCCGTTTATACAGCTACACTAGGAGAGAATGACCTAAAACCTACAGAGAGGAATATCAAGTATCAGCCTCTTAATACAGATGCCAGGACATGTCAAGATGTCATAACGGACCTTGGTTATCCATATGAAGCCATTCGTGTGATCACTGCTGATGGATATATTCTTCATTTGGAAAGAATACCGAGGCGAGATTCAAGGAAAGCTGTTTTTCTTCAGCATGGTGTTTTTGATTCATCAATGGGTTGGGTATCTAATGGAGTTGTTGGCTCTCCAGCTTTTGCAGCATATGACCAAGGGTATGATGTATTTTTGGGGAATTTTCGTGGTTTGGTTTCTCGGGAACATGTCAACAAGAACATATCATCACGTCAATACTGGCGGTATTCCATCAACGAGCATGGGACTGAGGATATCCCCGCTATGATAGATAAAATCCATCAAGTGAAAACTGCTGAATTGAGGCTTTCTAAACCTGATATTGAGGAGGAAACTGATACTGTTCAGCCTTACAAGCTTTGTGCAATTTCTCATAGTTTGGGAGGAGCTGCTATGATGATGTATGTTATCACGCAAAGGATACAAGGGAAACCCCATAGACTTTCAAGATTGATTTTATTGTCACCGGCCGGTTTTCATGACGATTCTAACATAGTTTTTTCTATGGCGGAGCTTCTATTAGTTTTAATGGCTCCTGTTTTGTCTCGTCTTGTGCCTGCCTTCTATATACCAACCAGATTTTTCCGAATGCTTGTCAACAAGTTAGCCCGGGATCTGCATAACTTACCTGCAGTTGGAGGACTGGTTCAAACTTTAATGAGTTATGTTGTTGGTGGAGACAGCTCAAACTGGGTTGGAGTTTTAGGATTGCCACATTATAACATGAATGACATGCCAGGTGTCTCTTTTCGCGTTGCTCTCCATCTTGCGCAGATGAAGCGTACCGGAAGGTTCAGAATGTTTGATTATGGGAGTGCATCTGCCAATACGGAAGTTTATGGCTCACCGGAGCCGTGGGACTTGGGTGAACACTATGGACTCATTGACATTCCTGTTGATCTTGTTGCTGGACAGAAGGACAAAGTGATAAGACCTTCAATGGTAAAGAGACACTATAAATTGATGAAGGGTGCTAAGGTAGATGTTTCATATAATGAGTTTGAATATGCACATTTGGACTTCACCTTCTCCCACCGTGAAGAACTCTTGTCATATGTTATGTCATGCTTGCTGCTTGTGGATCCTAATCCTAAACATCATGCGAATCAAAGGGTTCTAAGGTCAAGGAGGAAAGGACAGGTTGCAGCTAGCGGGTAG 2109 0.4168 MMQRCVDHVLAVTKESLKAITYESLNNIVRLINGVSALLLALLPGKANILEGIHGWELRPTFRGPRFPRWMENGVSSFNQFIHELSVDSDNSSPEYSSGDEDSDKYSDRYDYPPSPASQSSRTSEAGFTKYSRHQMDWIQYILLLILFPLKLLLWIPLHLLQLVYYGVLKSLSISGNKRPPHLHAHKRVLSLKEHIIHRTTDRRRGVVEDLYQGIELSIEAVFDVVHKAAHLLLSPSEAFGKLFRLFSSHEGSSSKEDRDSVEDTSVYTATLGENDLKPTERNIKYQPLNTDARTCQDVITDLGYPYEAIRVITADGYILHLERIPRRDSRKAVFLQHGVFDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRQYWRYSINEHGTEDIPAMIDKIHQVKTAELRLSKPDIEEETDTVQPYKLCAISHSLGGAAMMMYVITQRIQGKPHRLSRLILLSPAGFHDDSNIVFSMAELLLVLMAPVLSRLVPAFYIPTRFFRMLVNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVSFRVALHLAQMKRTGRFRMFDYGSASANTEVYGSPEPWDLGEHYGLIDIPVDLVAGQKDKVIRPSMVKRHYKLMKGAKVDVSYNEFEYAHLDFTFSHREELLSYVMSCLLLVDPNPKHHANQRVLRSRRKGQVAASG 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00195 702 SUPERFAMILY alpha/beta-Hydrolases 294 671 IPR029058 -
Cca08g00195 702 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 9 685 - -
Cca08g00195 702 PANTHER LYSOSOMAL ACID LIPASE-RELATED 9 685 - -
Cca08g00195 702 MobiDBLite consensus disorder prediction 88 124 - -
Cca08g00195 702 Pfam Partial alpha/beta-hydrolase lipase region 297 351 IPR006693 GO:0006629
Cca08g00195 702 Gene3D alpha/beta hydrolase 286 674 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00195 Cca-Chr8 2718012 2723774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00195 2 680 Lipid Metabolism Gene Families AT1G18460 69.062 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00195 - - gmx:100785512 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00195 08 2718012 2723774 Cca08g00195 08 2718012 2723774 ECH
Cca09g02690 09 52536233 52540117 Cca08g00195 08 2718012 2723774 PCT