Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02522 ATGTCAATTGCTGAGTTTGCTTTGAGTTCAGTTTGCAACGACAAGGTACATTGGGAAGGGCTGCCAGGACATTGTTCTGGTGAGCCAATCTTGATTTACCTCACTGTGGATGGTGCTGTCACCCCAATGCGCGTGTTCGAGTCCGATTCCATTGCCTCGGTGAAACTGAGGATTCAGCAGTGCAAAGGCTTCGTGGTGAAGAAGCAGAAGTTGGTTTTTGGTGGCAGAGAGCTTGCTCGCAATGGCACACTCATCAAGGAGTATGGTGTCACTGATGGCAACGTACTTCACTTGGTTCTGCGCCTCTCTGATATCCTCTTCATTGTTGTGAAGACCGTTAATGGGAAGGAATTTGAATTCCACATCGACAGGCACAAGAATGTAGGGTATCTAAAGCAACGCATTAGAAAGAAGGGGGAAGGTTTCATTGATCTTGAGGAACAAGAGCTTTTCTGCGATGATGAGAAGCTCGATGACCAGAGGCTCTTCCATGACATATGCAAGAGTGATGATGATGTGATTCATTTGATAATTAAGAAATCAGCTAAGGTAAGGACTACACCAATTCATAAAGACTTGAAGCTCTCAGTGGAGGCAGTGGCACCATGTGAGAGAGTGAAACATGTAAGAGAGACTAGGGACAAACATGTTCACATAGCAAAGGTCCCACCTGATGTAGGTTTTTGGTTGGAGCCAATTATTGTGAATCCCAAGATCATTTTTTTCCCTTTCCTTTGGGACATGATCACATCCACATTTGAGGGCTTGAAGAATGGAAATCACCCTATTAGGTCTTCTGAGGGCACTGGAGGGACTTACTTGATGCAAGATTCAACAGGTCAGGAGCATGTTTCGGTTTTCAAGCCCATGGATGAGGAACCAATGGCTGTGAACAACCCAAGAGGTCTTCCAACTTCATCCAATGGTGAGGGTTTGAAAAGAGGGACAAAGGTTGGAGAAGGAGCCTTGAGGGAAGTTGCAGCATACTTATTGGATCATCCGAAGAATGGGCCACGTTTGGTGACAGGTGAAGCAGTCGGGTTTTCTGGTGTTCCCCCTACTGTTATGGTGCAGTGTTTGCACCGAGAGTTTAACTACCCAAATGGGTTTGCTTGCTCCTCAAAACATGTCAAGATTGGGTCACTGCAGAAGTTCATGAGTAATGATGGTAATTGTGAGGACATTGGACCCTGGGCTTTCCCTGTGGAGGAGGTGCATAAGATTACTGTGCTTGATATAAGATTGGCTAACGCAGACAGGCATGCTGGGAATATATTGATCAGAAAGGAAGCAGATGGCCACATGAAGCTCATTCCTATTGATCATGGCTATTGTCTGCCAGATAAATTTGAAGATTGTACATTTGATTGGATTTACTGGCCACAAGCACGTCAGCCTTATTCTCCTGAGACTGTTGATTATATCAAATCTCTGGATGCTGAAAAAGACTTGGAACTTTTGAAATGTTATGGATGGGATATTCCACTTGAGTGTGCTAGAACATTTCGGATTTCCACAATGTTGCTGAAGAAAGGAGTTGAGAGAGGCCTTACTCCCTATGTTATTGGAAGCATTATGTGCCGGGAAAATTTGAACAAAGAATCTATgattgaagagattattggggaagcccaatattccttgctccctggcatggaggaatcggcatttattgaagccatctcccaaaTCATGGATTCTCGTCTTGATAAACTTGCAAATTAG 1725 0.4209 MSIAEFALSSVCNDKVHWEGLPGHCSGEPILIYLTVDGAVTPMRVFESDSIASVKLRIQQCKGFVVKKQKLVFGGRELARNGTLIKEYGVTDGNVLHLVLRLSDILFIVVKTVNGKEFEFHIDRHKNVGYLKQRIRKKGEGFIDLEEQELFCDDEKLDDQRLFHDICKSDDDVIHLIIKKSAKVRTTPIHKDLKLSVEAVAPCERVKHVRETRDKHVHIAKVPPDVGFWLEPIIVNPKIIFFPFLWDMITSTFEGLKNGNHPIRSSEGTGGTYLMQDSTGQEHVSVFKPMDEEPMAVNNPRGLPTSSNGEGLKRGTKVGEGALREVAAYLLDHPKNGPRLVTGEAVGFSGVPPTVMVQCLHREFNYPNGFACSSKHVKIGSLQKFMSNDGNCEDIGPWAFPVEEVHKITVLDIRLANADRHAGNILIRKEADGHMKLIPIDHGYCLPDKFEDCTFDWIYWPQARQPYSPETVDYIKSLDAEKDLELLKCYGWDIPLECARTFRISTMLLKKGVERGLTPYVIGSIMCRENLNKESMIEEIIGEAQYSLLPGMEESAFIEAISQIMDSRLDKLAN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02522 574 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 1 573 - -
Cca09g02522 574 SMART ubq_7 30 101 IPR000626 GO:0005515
Cca09g02522 574 SMART ubq_7 106 179 IPR000626 GO:0005515
Cca09g02522 574 Gene3D - 107 195 - -
Cca09g02522 574 SUPERFAMILY Ubiquitin-like 101 180 IPR029071 -
Cca09g02522 574 Pfam Ubiquitin family 108 180 IPR000626 GO:0005515
Cca09g02522 574 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
Cca09g02522 574 Gene3D - 31 105 - -
Cca09g02522 574 SUPERFAMILY Ubiquitin-like 34 103 IPR029071 -
Cca09g02522 574 Pfam Phosphatidylinositol 3- and 4-kinase 268 521 IPR000403 -
Cca09g02522 574 SUPERFAMILY Protein kinase-like (PK-like) 415 572 IPR011009 -
Cca09g02522 574 CDD Ubl_ubiquitin_like 108 177 - -
Cca09g02522 574 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 259 556 IPR000403 -
Cca09g02522 574 ProSiteProfiles Ubiquitin domain profile. 106 183 IPR000626 GO:0005515
Cca09g02522 574 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 573 IPR044571 -
Cca09g02522 574 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02522 Cca-Chr9 50737259 50740355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02522 1 573 Acyl Lipid Metabolism Gene Families AT5G24240 56.846 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02522 - - gmx:100809172 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00499 06 15176492 15178402 Cca09g02522 09 50737259 50740355 PCT