Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00499 atgtCTCGGAAGCTCGACAGCCCTGTGCAGACTCAGATGGCTGTGGCGGTGATAAGGAGCAGTCCCCTCGGGAGAGAGTATCATGGGAGACAACCTGCGGGGAGGAGGCGTGTGTTTGTGCAAACGGAGAAAGGGTGTGTGTTGGGTATGGAATTGGATCGTGGTGACAATGCTCACACTGTTAAGAGGAGGTTGCAGATAGCGCTCAATGTCCCTATTGAAGAGAGTTCACTCACTTTTGGGGACATAGTTTTGAAGAATGACCTCAGTGCTGTTAGGAACGATTCCCCACTTTTGCTCACTAGGAATCTCATGCATAGAAGCTCCTCCACGCCGTGTCTTTCGCCCACGGGGAGGGACTTTCAGCAGAGGGATAAGAGTGGCCCTATTGAGATTTTGGGGCAGTCGAATCGCCTTGATAGGATAAAGCACATGATCAAGGACATTGTCAAGGCGATTAAGATGGGGATTGATCCAATTACGGTGCATAGTGGGCTTGGAGGTGCTTACTATTTCAGGAACAGTAAGGGGGATAGTGTTGCGATTGTGAAGCCAACTGATGAGGAGCCTTTTGCTCCGAATAACCCAAAAGGCTTTGTTGGCAAGGCCCTTGGGCAACCTGGGCTTAAGCGATCGGTTCGGGTCGGCGAGACCGGGTTTAGGGAGGTTGCGGCGTATCTTCTTGACTATGATCATTTTGCCAACGTGCCCCCGACGGCGTTGGTGAAGATTACACACTCTGTGTTCAATGTGAATGATGATGTCAATGGGAACAATCTGTGGAGGAAGAGGCTGGTTAGCAAGATTGCATCTTTCCAGCAGTTTATTCCTCATGATTTTGATGCCAGTGATCATGGGACATCGAGCTTCCCGGTTGCTTCTGTGCATCGAATTGGGATTCTAGACATTAGGATTCTTAACACAGATAGGCATGCTGGGAACTTGTTGGTTAGAAAATTTGATGGCATTGGGGGTTTTGGTCAGGTGGAGTTGATTCCCATTGATCATGGGCTCTGCCTGCCTGAGACTTTGGAGGATCCTTATTTTGAGTGGATTCATTGGCCACAGGCTTCAATTCCGTTTTCGGAGGATGAGCTTGCCTACATTGAAGGTCTCGACCCCTATCGCGATTGCGAGATGCTGAGAATGGAGCTGCCAATGATCCGAGAGGCTTGTCTCAGAGTCTTGGTGTTGTGCACCATTTTCCTCAAGGAGGCTGCGGCTTTCGGCCTTTGTCTTGCTGAAATTGGTGAGATGATGACTAGGGAGTTTCGCAGCTGTGAGGAGGAGCCAAGTGAGCTTGAGGTTGTTTGTTTGGAGGCGAGGAAGATGGTGGCGGAGAGGGAGGAACCGTCGCCTAGGTTTGAGATGAGAGATGATGAGTTTCAGTTTGATATTGATTATGATGATATTGGATCAGATTTTTCACCAAAGGTGGCAATAGATGACCCTCTAATCAGAACATCTTTCCAGCCTGTGTTTGGGAACGGGCATGCTCGCAGCCCGCTTTCCAAGTTGGATGAATGCATTGAGGAGGGAGAGGAGGAAAGTGAGGGAGAATCTCCTCAGGGATTTGTTACTTCTGCTGAAGAAAAAATCCCAACTGTTCCAGAACTTTCAGTGTCACTGAGAAATACCATGTTGGAAGGGAAAAACCAGAATCACCAGAAATATTCTGGAGGGAAGGTGGATGGTGGCCATTTTGCAAATTCATCATCTGGTCATAAGAGTGCCAATGAGCAGCTTCCTGCTAGCATAAGCTTTGTGCATGTGGCAGATATGACTGAGGATGAATGGACATTGTTTCTGGAGAAGTTTCAAGAGCTGCTGCATCCGGCATTTGCCAAGAGGAAATCTGTAACCTTAGGTCAGAGGCAGAGACAGAGACTTGGTACTTCGTGCCAGTTTTGA 1911 0.4846 MSRKLDSPVQTQMAVAVIRSSPLGREYHGRQPAGRRRVFVQTEKGCVLGMELDRGDNAHTVKRRLQIALNVPIEESSLTFGDIVLKNDLSAVRNDSPLLLTRNLMHRSSSTPCLSPTGRDFQQRDKSGPIEILGQSNRLDRIKHMIKDIVKAIKMGIDPITVHSGLGGAYYFRNSKGDSVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDYDHFANVPPTALVKITHSVFNVNDDVNGNNLWRKRLVSKIASFQQFIPHDFDASDHGTSSFPVASVHRIGILDIRILNTDRHAGNLLVRKFDGIGGFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSEDELAYIEGLDPYRDCEMLRMELPMIREACLRVLVLCTIFLKEAAAFGLCLAEIGEMMTREFRSCEEEPSELEVVCLEARKMVAEREEPSPRFEMRDDEFQFDIDYDDIGSDFSPKVAIDDPLIRTSFQPVFGNGHARSPLSKLDECIEEGEEESEGESPQGFVTSAEEKIPTVPELSVSLRNTMLEGKNQNHQKYSGGKVDGGHFANSSSGHKSANEQLPASISFVHVADMTEDEWTLFLEKFQELLHPAFAKRKSVTLGQRQRQRLGTSCQF 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00499 636 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 5 636 IPR044571 -
Cca06g00499 636 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 156 453 IPR000403 -
Cca06g00499 636 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE 5 636 - -
Cca06g00499 636 CDD Ubl_ubiquitin_like 38 88 - -
Cca06g00499 636 MobiDBLite consensus disorder prediction 510 531 - -
Cca06g00499 636 Pfam Phosphatidylinositol 3- and 4-kinase 166 416 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00499 Cca-Chr6 15176492 15178402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00499 1 636 Acyl Lipid Metabolism Gene Families AT1G26270 69.457 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00499 - - gmx:100776828 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00499 06 15176492 15178402 Cca06g00499 06 15176492 15178402 ECH
Cca06g00499 06 15176492 15178402 Cca09g02522 09 50737259 50740355 PCT