Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02521 ATGGCGGCCTCCGCCCCTCCTACAGCGCCGCGCCCCAAGCGCCCGCGGCCGCCGTCGGGGCGCACCAACCTGGCCTCCTGCGTGGTGGCCACCAtcttcctaatcttcatcgtcatcgtcatcctcatagtGTACTACACCGTCTTCAAGCCGCAGGACCCCAAGATCGCCGTGAACGCCGTACAGCTTCCGTCCTTCTCGGTGGCTAACGGCAGCGTGAACTTCACCTTCTCCCAGTACGCCGCCGTCCGGAACCCTAACCGCGCGGCCTTCTCCCACTACGACAGCTCCCTCCAGCTGCTCTACTCCGGCAGCCAGGTGGGGTTCATGTTCATCCCCGCCGGCGAGATCGACGCCGGGCGGACACAGTACATGGCGGCCACCTTCTCCGTGCAGTCGTTCCCCCTCTCGGCGCCCCAAAGGCTGGGCCCCACGCTTCCGAACGGCGACGTAAAGAAGAAGAGTCATACACCACACTTCCACTTCCACTCTGGCTCTCCCTCTGCCACCGCAGGCCATGGAGGCCTCCGCCCCTCCAACAGCGCAGCGGCCCAAGCGTCCGGTAGCCAGGTGGGGTTCATGTTCATCCCCACCAGCGAGATCGATGTTGGGCGGACGCAGTACATGGCAGCCACCTTCTCCGTGCAGTCGTTCCCCCTCTCGGCATCCCAAAGGCTGAGCCCCATGCTGCCGAACTATGACAGAGTGGGCTTCAACTATGGGCTGAGGGTCCAGCCCACTATGGAGATCGAGTCTAAGCTGGAAATGGCGGGGCGTGTTCGAGTCTTGCACTTTTTCACACATCGCGTTTACGCCAAAGCCGGTTGCAGGGTTGCCATTGCCGTATCCGATGGATCTGTCTTAGGTTTTCACTGCTAA 879 0.6041 MAASAPPTAPRPKRPRPPSGRTNLASCVVATIFLIFIVIVILIVYYTVFKPQDPKIAVNAVQLPSFSVANGSVNFTFSQYAAVRNPNRAAFSHYDSSLQLLYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSAPQRLGPTLPNGDVKKKSHTPHFHFHSGSPSATAGHGGLRPSNSAAAQASGSQVGFMFIPTSEIDVGRTQYMAATFSVQSFPLSASQRLSPMLPNYDRVGFNYGLRVQPTMEIESKLEMAGRVRVLHFFTHRVYAKAGCRVAIAVSDGSVLGFHC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02521 292 Pfam Late embryogenesis abundant protein 82 140 IPR004864 -
Cca09g02521 292 MobiDBLite consensus disorder prediction 154 182 - -
Cca09g02521 292 PANTHER OS05G0238400 PROTEIN 15 144 - -
Cca09g02521 292 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 186 292 - -
Cca09g02521 292 MobiDBLite consensus disorder prediction 1 20 - -
Cca09g02521 292 PANTHER OS05G0238400 PROTEIN 186 292 - -
Cca09g02521 292 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02521 Cca-Chr9 50731835 50732828 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02521 - - thj:104817593 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01866 06 34083182 34083968 Cca09g02521 09 50731835 50732828 PCT