Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02512 ATGGCAGAAAAGAGGTTCATCGTTGAGGTGGAGAAAGCCACAGAGGCAAGAGAAGGAAGGCCATCAATGGGTCCTGTTTATCGCAGCATTTTTGCCAAAGATGCACTTCCTCCTCCCATCCAAGGTCTTGATACATGTTGGGATATTTTCAGAATGTCAGCTGAGAAAAATCCAACAAAGCCAATGCTTGGTGTTCGTGAAATCGTGAATGGGAAGGCTGGCAAGTACAAGTGGCAAACTTACAAAGAAGTATACGACTTGGTGGTAAATGTTGGAAATTCCATTCGTGCTTGTGGTTACGGGGAGGGTGTAAAATGTGGTATCTATGGTGCCAATTGCCCAGAATGGATTATGAGCATGGAGGCCTGCAATGCTCATGGACTTTACTGTGTTCCCTTATATGATACGTTAGGTTCTGGAGCTGTGGAATTTATTATATGTCATGCAGAGGTCACAATTGCATTTGTCGAAGAAAAGAAGATACCTGAGCTATTGAAGACATTTCCAAAGGCAACACAATATCTCAAGACAATTGTGAGCTTTGGAAAGGTTACTCCTGAACAAAAGGAAGAAATCGAAAAGTTTGGGTTGACAGTTTATTCATGGGATGAATTTTTGCAAGTGGGTAAAAATCAAAGTTTTGATTTTCCTGAGAAAAAGAAAAGTGATGTGTGTACAATAATGTATACGAGTGGAACTACTGGTGACCCAAAAGGAGTATTGATTTCCAATCAGAGCATTATTACACTTTTAGCTGGAATTCAACAAGTGTTATTGGGTTGCAATGAAAAATTGACTGACAAAGATGTATACCTATCATACCTTCCTCTTGCACATATCTTTGATAGGGTTATCGAGGAAGCAATGATATTGCATGGTGCCTCAATAGGTTTCTGGCGTGGAGATATCAAATTGTTATTAGAAGACATTGGAGAGCTAAAGCCAACCATTTTTGTTGCTGTTCCCCGTGTGCTTGATAGAGTGCATACTGGTTTGACACAAAAGATTACTACAGGGAGCTTTGTAAAGCAGACAATGTTCAATTTTGCCTACTCATACAAGTTGCATAACATGAATAAAGGGCAAACTCATGATGTGGCATCTCCCCTATTTGACAAAATTGTATTTAGTAAGGTGAAGCAAGGTTTAGGGGGTAACGTACGCATAATTTTGTCTGGAGCAGCACCTCTATCTAGACATGTGGAAGGTTTTCTACGGGTGGTGACTTGTGCTCATATTCTACAAGGATATGGTTTGACAGAAACTTGTGCGGGCACATTTGTTTCATTACCAAACCAAACAGACATGCTTGGAACGGTGGGGCCTCCTGTACCATTTGTGGATGTATGCCTCGAATCAATACCGGAAATGGGATATGATGCTCTTGCTAGCACACCAAGAGGAGAAATTTGTGTGAAGGGAAGTACTGTGTTTTCAGGCTACTACAAACGTGAAGACCTCACCAAAGAGGTTATGATTGATGGATGGTTTCACACAGGGGATATTGGAGAGTGGCAACCTAATGGAACCATGAAAATTATTGATCGGAAAATGGAAGCATGA 1563 0.4095 MAEKRFIVEVEKATEAREGRPSMGPVYRSIFAKDALPPPIQGLDTCWDIFRMSAEKNPTKPMLGVREIVNGKAGKYKWQTYKEVYDLVVNVGNSIRACGYGEGVKCGIYGANCPEWIMSMEACNAHGLYCVPLYDTLGSGAVEFIICHAEVTIAFVEEKKIPELLKTFPKATQYLKTIVSFGKVTPEQKEEIEKFGLTVYSWDEFLQVGKNQSFDFPEKKKSDVCTIMYTSGTTGDPKGVLISNQSIITLLAGIQQVLLGCNEKLTDKDVYLSYLPLAHIFDRVIEEAMILHGASIGFWRGDIKLLLEDIGELKPTIFVAVPRVLDRVHTGLTQKITTGSFVKQTMFNFAYSYKLHNMNKGQTHDVASPLFDKIVFSKVKQGLGGNVRIILSGAAPLSRHVEGFLRVVTCAHILQGYGLTETCAGTFVSLPNQTDMLGTVGPPVPFVDVCLESIPEMGYDALASTPRGEICVKGSTVFSGYYKREDLTKEVMIDGWFHTGDIGEWQPNGTMKIIDRKMEA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02512 520 Pfam AMP-binding enzyme 51 517 IPR000873 -
Cca09g02512 520 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 518 - -
Cca09g02512 520 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 518 - -
Cca09g02512 520 SUPERFAMILY Acetyl-CoA synthetase-like 43 517 - -
Cca09g02512 520 Gene3D - 42 516 IPR042099 -
Cca09g02512 520 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02512 Cca-Chr9 50634267 50641683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02512 3 517 Acyl Lipid Metabolism Gene Families AT4G23850 71.845 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02512 K01897 - gmx:100811306 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01853 06 33939883 33947992 Cca09g02512 09 50634267 50641683 PCT