Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02471 ATGTTTCCTGGGTTCAAATTTCTATCAAGAGCAGTGCATGAAGAACTAGAAAGTGAGCATGATGGGGAAAGAAACAAGTACCCTTTAACAGAAGCAAGTTTGTGCACGTCCCTCACACTAACAGTTTGGAGAAAATCCCTTGTGATTAGTTGTAAAGGATTCACTGTCATCGATTCATATGGAAATCTGGCGTATCGGGTTGATAATTACATCGTGCACCCCAACGAACTCATTCTTATGAACGCTTCAGGAAACTCTCTCCTCACCATGCGCCGCTCCAGGAAGCTAGGATTAGTAGATAGCTGGTTTGTGTATGAAGGAGAAAAGGGGAAGCAGGGCAGGAGTAAGTCAAGAGAGAGTCCAGTTTGTTGTGTGAAGAAGCGTGTGAATATTTTAGACGGAAAACCCAAGGTTCAGGCCTACGTGTACCGCGTAGCCTCGGATTCAGATAAACGACAAGCGGCGTTAACGGTTGAAGGTTCCTATGCACATAGGACGTGTAAAGTGTTGGATAAGTACAAGAGGGCCGTAGCTGAAATCAAGAGAAAGGAGGCCAATACCAAAGACGTCTCTTTCGGGATAGAGATTTTTCAGTTAGTTGTTCACCCTGGCTTTGATCCTACCTTTGCCATGGCACTCGTTTTACTACTGGATCAAATGTTTTCATAA 669 0.4425 MFPGFKFLSRAVHEELESEHDGERNKYPLTEASLCTSLTLTVWRKSLVISCKGFTVIDSYGNLAYRVDNYIVHPNELILMNASGNSLLTMRRSRKLGLVDSWFVYEGEKGKQGRSKSRESPVCCVKKRVNILDGKPKVQAYVYRVASDSDKRQAALTVEGSYAHRTCKVLDKYKRAVAEIKRKEANTKDVSFGIEIFQLVVHPGFDPTFAMALVLLLDQMFS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02471 222 PANTHER PROTEIN LURP-ONE-RELATED 17 10 221 - -
Cca09g02471 222 Pfam LURP-one-related 38 215 IPR007612 -
Cca09g02471 222 Gene3D - 35 222 IPR038595 -
Cca09g02471 222 SUPERFAMILY Tubby C-terminal domain-like 38 221 IPR025659 -
Cca09g02471 222 PANTHER - 10 221 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02471 Cca-Chr9 50204828 50206667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02471 - - gmx:100796827 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01822 06 33642258 33643191 Cca09g02471 09 50204828 50206667 PCT