Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01822 ATGAAGGTGTTTCCTAGGCTAAAATCCGTGTCAAGAGCAGTGCACGAGGAACAAGAACGTGAGCATGATGATGAGGTAAAAAGCTTGTGCACATCCCTAACAGTTTGGAGAAAATCCTTGGTCATGAGTTGCAAAGGGTTCACGGTGATTGATTCTTATGGGAATCTTGTGTATCGTGTCGACAATTATATAGGTCGACCCAACGAAGTCACTCTCATGGATGCTTCAGGAAAATCTATTCTCACCATGTGCCGCCGCAGGAAGCTTGGATTGTTAGATAGTTGGTTTGTGTATGAAGGGGAAGTGGGGAACCAGCGTAGAAGTAAGTTAGAGAGTCCAATTTGTTGTGTACGGAAGCATGTGAATATTTTACATGGCAACACCAACGTTAAGGCCTACGTGTACCGCGGAGCCTCACTTTCAGATAAGCGTTGTGCTGCGTTTACTATAGAGGGTTCCTACGCACATCGTACGTGTAAGGTGTTGGATGAGTGCAGAAGAGTGGTGGCTGAAATTAGGAGGAAGGAAGCTAACACCAAAAACGTCTCTTTTGGGATTGAGATTTTTCAGTTAATTGTGCACCCAGGCTTTGATTCTGCCTTTGCCATGGCACTCGTCTTACTACTCGATCAAATGTTTTCGTGA 645 0.4481 MKVFPRLKSVSRAVHEEQEREHDDEVKSLCTSLTVWRKSLVMSCKGFTVIDSYGNLVYRVDNYIGRPNEVTLMDASGKSILTMCRRRKLGLLDSWFVYEGEVGNQRRSKLESPICCVRKHVNILHGNTNVKAYVYRGASLSDKRCAAFTIEGSYAHRTCKVLDECRRVVAEIRRKEANTKNVSFGIEIFQLIVHPGFDSAFAMALVLLLDQMFS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01822 214 PANTHER PROTEIN LURP-ONE-RELATED 17 14 213 - -
Cca06g01822 214 Pfam LURP-one-related 26 207 IPR007612 -
Cca06g01822 214 PANTHER - 14 213 IPR007612 -
Cca06g01822 214 SUPERFAMILY Tubby C-terminal domain-like 26 213 IPR025659 -
Cca06g01822 214 Gene3D - 26 214 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01822 Cca-Chr6 33642258 33643191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01822 - - gmx:100804978 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01822 06 33642258 33643191 Cca06g01822 06 33642258 33643191 ECH
Cca06g01822 06 33642258 33643191 Cca09g02471 09 50204828 50206667 PCT