Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02456 ATGGGAGAGAAAGAGACAGAGAAGGCAATCTGGGAGCAGATGAGAGGCCCTCCCATTGCCTCACACCACCCAACCATACCCAAGATTCTACTCCTTCTCATCCTCTTCGTTTCCCTCACCTACGTAGTCTACACGCTCAAGCTCGTCTCCACCTCACGCGCCTGCAACCACCTTCCCTTCGCCACTCAAACCGACCCCGAGGACCGCACCGCCCTCCGCCACGTCGTCTTCGGCATCGCCGCCTCCGCCAAGCTCTGGAACCAGCGCAAGAACTACATCAAGCTCTGGTACAGACCTAGGGAGATGCGCGGCGTCGTCTGGCTCGACCAGAACATCACGCCGGAGCCCGACGAGGACTCTCTCCCGCCGGTGAGAATCTCCGGCGACACCGCCAGGTTCAAGTACACGAACCGGCAGGGGCACCGGTCGGCGATCAGGATCTCGCGGATCGTGTCGGAGACGCTGCGGCTGGGGCTGAAGGACGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTGACGGAGAACCTGATTCGCGTTCTGAGGAAATACGATCATAACCAGTTCTATTACATTGGAAGCTTATCGGAGTCCCACTTGCAGAACATTTTCTTCTCCTACAACATGGCCTACGGTGGCGGAGGTTTCGCCATTAGTTACCCTCTCGCGAAAGCTCTCTACAAAATGCAGGACCGTTGCATTCAGCGTTACCCTGCTCTCTATGGCTCCGACGATAGAATGCAGGCTTGTATGGCCGAACTCGGTGTTCCACTCACTAAGGAAATCGGTTTTCACCAGTACGATGTGTATGGAAACCTGTTGGGGCTTCTTGCATCTCACCCCGTGACTCCTTTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATTTTCCCCAACATGAGCCGTGTACAAGCCCTTGAACGCCTCACCATACCAATGAAGCTTGACTCGGCAGGCCTCATGCAGCAATCCATCTGCTACGACACATCCAAGAGCTGGACTGTCTCCGTTTCCTGGGGTTTTGCTGTTCAAATATTTCGCGGAGTCTTTTCACCGCGAGAGATGGAAATGCCTTCAAGAACATTCTTGAACTGGTATAGAAGAGCAGATTACACTGCATATGCATTCAACACGCGTCCAGTTAGTCGAAATCCATGTCAGAAGCCTTTTGTATTTTACTTCTCCAAGGCAAAGTACAACTCTACAATGCACCAAATAGTTAGTGAATATGAAAGACATCGTGTCCCTCATCCAGATTGCAGGTGGAAAATGGCTAATCCTGCTGCTCTTGACAAAGTCGAGGTGTATAAGAAGCCAGATCCCCATCTATGGGACAGAGCTCCAAGGAGAAACTGTTGCAGAGTGAACAAGTCCAGAGAGAAAGGGACCATGGTGATACATGTGGGCATGTGTAGTGAAGGTGAAGTAAGCGAAACATAA 1449 0.5252 MGEKETEKAIWEQMRGPPIASHHPTIPKILLLLILFVSLTYVVYTLKLVSTSRACNHLPFATQTDPEDRTALRHVVFGIAASAKLWNQRKNYIKLWYRPREMRGVVWLDQNITPEPDEDSLPPVRISGDTARFKYTNRQGHRSAIRISRIVSETLRLGLKDVRWFVMGDDDTVFVTENLIRVLRKYDHNQFYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALYKMQDRCIQRYPALYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLLGLLASHPVTPLVSLHHLDVVEPIFPNMSRVQALERLTIPMKLDSAGLMQQSICYDTSKSWTVSVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKYNSTMHQIVSEYERHRVPHPDCRWKMANPAALDKVEVYKKPDPHLWDRAPRRNCCRVNKSREKGTMVIHVGMCSEGEVSET 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02456 482 Gene3D - 62 317 - -
Cca09g02456 482 Pfam Protein of unknown function, DUF604 203 456 IPR006740 -
Cca09g02456 482 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 67 481 - -
Cca09g02456 482 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 21 61 - -
Cca09g02456 482 PANTHER FRINGE-RELATED 67 481 - -
Cca09g02456 482 PANTHER FRINGE-RELATED 21 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02456 Cca-Chr9 50021067 50024401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02456 3 481 Glycosyltransferase AT4G23490 67.052 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02456 - - gmx:100818244 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01810 06 33520448 33523769 Cca09g02456 09 50021067 50024401 PCT