Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02444 ATGACACGAACTAATGGGAATGATGCCAGAGCCGTTAACAACACTTTCGAAACTATAAACGCTGCTGCTTTTGCCATAGCCTCTGCCCAGAATCGCGTTATTCAACCTCCTTCCCAGAAGAAAAGATGGGGAAACTGGTTGAGCAAAATTGGGTGTTTTGGATATCAGAAAAACCGAAAGCGCATAGGGCATGCTGTGCTTGTTCCAGAAACAATCCCCAATGGAGCTGATCCTGCTGCAGCTGTTAGTTCAACTCAAGCGCCTAGTATAACACTTCCCTTCGTTGCGCCTCCTTCGTCACCTGTATCTTTCTTTCAATCAGAACCTCCTTCAACTGCACAATCACCAGTTGGTAAATTATCTCACACTTGTGTGTCTGCCAGCATGTACTCTCCTGGTGGCCCTGCCTCAATCTTTGCCATTGGCCCTTATGCTCATGAAACTCAATTAGTCTCACCACCTGTTTTCTCAGCTTCCTCCACTGCTCCTTTCACTCCACCGCCCGAATCCGTCCACATGACCACGCCTTCTTCGCCCGAGGTTCCATTTGCTCAGCTACTAGACCCCAATAGGAACGGTGAAACCTTTCAGAGGTTCCAAATATCTCACTATGACTTCCAATCCTATCAGTTTCATCCCGGAAGTCCTGTTGGTCAACTGATATCACCAAGATCTGCCATCTCAGCTTCCGGCACCTCATCTCCACTCCCTGACTCTGAATTTAATGCCACTTTCTCCCATATCCTTGATTTCCAAAGAACAGACCCTCCCAAGCTTCTCAACTTAGATAAACTATCTGCTTATGAAAAGCAAAAGTCAAACCAAGGTTCTGGATCTTTGACCCCAGATGCTGCAAGGTCCACAACTCAAACTGGTTTTCTTTCAAATCATTGGGTTTCTGAGATCAAAATGTCTCCACATCCAAGCAATAATCGCCTGAGTGAGATTAGTATAAACCACAGGGTTTCATTTGAATTATCCTCCCAAAAAGTATTGAAATCTCTTGAGAACAAGCCTGCAGCATCAGCATGGACTAAGGTCCTGTCAAAACTGAAAGATGATGCAGCAACAGCTGACAAAGAAGAAAATTCTGTAGAAACAGAGCGTGATGACAAACAAGTCCTTGCTGAAAATCCCAATGATCAACCACTGGAAACCACATTGGGTGGAGATAAGGCAACAGTTAATGAGAAGGATCAGTCCTTGACTCTTTCTTCTGCTAAAGAATTCAATTTTGATAATGCAGATGGAAGAGATAATGTAGTTGCTGATTGGTGGGCTAATGAGAAAGTTGCAGGGAAGGAGGGAGGGGCCTCCAAGGATTGGTCCTTTTTCCCAATGATTCAACCTGGTCTCAGCTAA 1362 0.4486 MTRTNGNDARAVNNTFETINAAAFAIASAQNRVIQPPSQKKRWGNWLSKIGCFGYQKNRKRIGHAVLVPETIPNGADPAAAVSSTQAPSITLPFVAPPSSPVSFFQSEPPSTAQSPVGKLSHTCVSASMYSPGGPASIFAIGPYAHETQLVSPPVFSASSTAPFTPPPESVHMTTPSSPEVPFAQLLDPNRNGETFQRFQISHYDFQSYQFHPGSPVGQLISPRSAISASGTSSPLPDSEFNATFSHILDFQRTDPPKLLNLDKLSAYEKQKSNQGSGSLTPDAARSTTQTGFLSNHWVSEIKMSPHPSNNRLSEISINHRVSFELSSQKVLKSLENKPAASAWTKVLSKLKDDAATADKEENSVETERDDKQVLAENPNDQPLETTLGGDKATVNEKDQSLTLSSAKEFNFDNADGRDNVVADWWANEKVAGKEGGASKDWSFFPMIQPGLS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02444 453 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 3 453 IPR040420 -
Cca09g02444 453 MobiDBLite consensus disorder prediction 355 390 - -
Cca09g02444 453 Coils Coil 348 368 - -
Cca09g02444 453 MobiDBLite consensus disorder prediction 355 376 - -
Cca09g02444 453 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 3 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02444 Cca-Chr9 49829153 49831487 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02444 - - gmx:100791666 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01803 06 33417301 33420048 Cca09g02444 09 49829153 49831487 PCT