Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02430 ATGGGACAAGAGTTTGAGCTGGATCCTGATGACAAGTCTTCAGTGGGTCTGAGTCCCAATACTGTTCTTCCATCTCATCAATACTGTGTGAATGTAAAGAAGAGATCTAAAAAAGGAAAACACACTGGGAAAGATGATTTTCTTACTCTCAAGGAGGGCTTTGCTGAGATTAAATTTGCTCGCTTCCGCAGTTCTTCGTGTAAGAGCATTCTCTCTAGACCTCATGGATTGGAAGGTAATATAGAAACCAGACGTTGTTCCATGTATCAGAGTTCAGAGGAAGTGAAAAGTATAAAGAAAATGAGCACCATGGTAGAGGGAAGGAAAAAAATAGAAATTTCAAGGAGGAGTGACACCTCTTTCACGGGTAGCATTGTTGATTCTTTGTGTGGTTCAGATGATGAAGGCTCTGGACTGAGATCTTCAGAGACAGACTCCCCAGATAGCTTCATTGAAATTTGTATAAATTCAGATATTAAAAATAAGAACTCTACCACAGTACAACGGAGAGAGTCTATAAAGTTGAAGTCCAAAAGTGATAAAGTTGCTGATTCTGTAATCAATGGCAATTGTCGTCTTGAAAAGGACACAGTCCACTCACTGCAGAAGTCATTCTCGGCTAAGGCGGAAGTCTCTCGGTTGCCATCTCCATTAGGAAATTATTGCTCATCGAAAACAAGTCCAAAAGTTCAATTCACCCCTAGCAGGAAAAGGCTGGATCATTTTACAAAGTCAAAATCATTGAGAAGTTCAGTGAGTCAGAGACTGGAGAATAATGAGATCAAATCAAATGAGGCAGCAAACATTGCAAGAAATAGGACTTATCAGAAATCATTGCTAAATGACTTATCCAAAAAAGGAAAGCATTCTGACATTATTTCTGAGTTCATCAGCAGAGAAATCCAGTATTCAGGTATAGCTTCTTCACCAGTTCACCTGCATGGCAATCTCAAGTTGGAAAATAAACATGGAGTGCCATTTTTTGAGTTCAAGGTGAAGTGCCCTGAAGATGTGTTTGTGGCCAAGACATGCAGAGCAGGTAATGCTCTCAACTGGGTATATACTTTTCACTCCTTTGATAATAGAAAGAAGAGCAATGCAACTGGTTTGGGATCCCATGATTTTGGTAAAGATTCCTCAATAGTAGCACAAATGCTAGTTTCCTGTAATTTATATTCTGAACTAGAAGGCAGAGTATTTGATAACTCTATGGTGTCAGAATTTGTGTTGTATGATTTTACACACTCAAGGCAGAGTGTTTCGCATGAAAAGAAGTCTTTAAGTGAACCCGATGCTTCTAAAACTCTGAAAGCTTCCCATGTTGGATGGAAGGAAGAAACTTTGGGGCTGGATGAGAACCTGGTGGTCAAAAACAAATTTCAAGATAAACCTCGATCAAGCAATGTTGAATTTGATGATTTAAATTCTTATCCTTCCTTGTCCACTGAATGCTATTCAAACCTTGAAATTGCTGCCATTGTGTTGCAAATTCCGTTTTCTAAGAGGGAAAGTTTGAAGTACAAAAGAGGGGATAGAATAAGTGCTGAAGAATATTCCAACACAAGTGATCTCTCTGCAGTAAAAGATAGAAAGAGTCTTCAATGCGACCAAATCCAGGAACAGGTAAAGGTGGTAATACCATCTGGCAATCATGGTTTGCCAAATGCTGAAAACCAGGGTCCTTCGTCATTACTTGATCGGCTGAGACATGGTGGAGGTTGTGACTGTGGTGGGTGGGACATGGCCTGTCCCCTTATTCTTTTGGCAAATCCTAGTATTCAGTTTGCTGAAGATTGCCCACTTATGGAGGAACATCAACCATTTGAACTTTTTGTTCAGGGAGCAAAAGGAAGCAGTCCTACCTTCAGCATGAAAAGAATTGAAGAGGGGCATTATGCCGTTGATTTTCATGCACAATTATCCGCGTTACAAGCATTCTCCATCTGTGTTGCCATTTTGCATGGAACTTCTTCCTTCAGCAGCGGAGTGCATGAGAAAAACCAACAGTTATCTCAATGCAGTTCACTGAAAATGCTCATTGAGGAGGATGTAGATTTCTTTTTCAAACCAGTCACAACTGAGAAGAAGACTGGTTGCAAGAATCAGAAAGGAATTCCTCGATCCTATGTGTTGAATCCACCTTTTTCTCCTATTGCACGCGTATAA 2166 0.4012 MGQEFELDPDDKSSVGLSPNTVLPSHQYCVNVKKRSKKGKHTGKDDFLTLKEGFAEIKFARFRSSSCKSILSRPHGLEGNIETRRCSMYQSSEEVKSIKKMSTMVEGRKKIEISRRSDTSFTGSIVDSLCGSDDEGSGLRSSETDSPDSFIEICINSDIKNKNSTTVQRRESIKLKSKSDKVADSVINGNCRLEKDTVHSLQKSFSAKAEVSRLPSPLGNYCSSKTSPKVQFTPSRKRLDHFTKSKSLRSSVSQRLENNEIKSNEAANIARNRTYQKSLLNDLSKKGKHSDIISEFISREIQYSGIASSPVHLHGNLKLENKHGVPFFEFKVKCPEDVFVAKTCRAGNALNWVYTFHSFDNRKKSNATGLGSHDFGKDSSIVAQMLVSCNLYSELEGRVFDNSMVSEFVLYDFTHSRQSVSHEKKSLSEPDASKTLKASHVGWKEETLGLDENLVVKNKFQDKPRSSNVEFDDLNSYPSLSTECYSNLEIAAIVLQIPFSKRESLKYKRGDRISAEEYSNTSDLSAVKDRKSLQCDQIQEQVKVVIPSGNHGLPNAENQGPSSLLDRLRHGGGCDCGGWDMACPLILLANPSIQFAEDCPLMEEHQPFELFVQGAKGSSPTFSMKRIEEGHYAVDFHAQLSALQAFSICVAILHGTSSFSSGVHEKNQQLSQCSSLKMLIEEDVDFFFKPVTTEKKTGCKNQKGIPRSYVLNPPFSPIARV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02430 721 PANTHER EXPRESSED PROTEIN 6 721 - -
Cca09g02430 721 MobiDBLite consensus disorder prediction 1 20 - -
Cca09g02430 721 Pfam Domain of unknown function (DUF3527) 310 655 IPR021916 -
Cca09g02430 721 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 6 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02430 Cca-Chr9 49669035 49674193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02430 - - gmx:100778683 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01800 06 33381384 33395410 Cca09g02430 09 49669035 49674193 PCT