Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02423 ATGCTAAAAATAAAAACCTTATTGGCGACAACTCTGGTTCTAAACTCAGATTGTGACTCTAACTCGGGAGCTGTTTCACTGTTTGGTCTCGAATCCATCATGAGCACCCAATCAACCAACGATCCAAACTCCATCTTCCATTTTACTGTCAAGGATGCTAAAGGCCAAGATGTGGATCTTGCCACTTACAAGGGAAAAGTCTTGCTCCTTGTTAATGTTGCTTCTAAATGTGGCATGACCAACTCAAATTATGTGGAGTTGAATCAACTATACGGGAAATACAAAGACAAAGGGCTGGAAATTCTGGCATTTCCTTGTAATCAATTTGGTGAGGAAGAACCCGGAAGCAATGATGAAATTGCGGACTTTGTCTGCACTCGCTTTAAATCTGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGGGACAATGCTTCACCCTTGTATAAATTCTTAAAGTCAGGTAAGTGGGGAATTTTTGGGGATGATATTCAGTGGAACTTTGCCAAGTTTCTGGTTGACAAAGATGGGCAAGTGGTAGATCGTTATTATCCCACCACATCTCCTCTTAGCCTTGAGCGAGACATCCGTAAGCTAATTGGTATTGTCTAA 612 0.4101 MLKIKTLLATTLVLNSDCDSNSGAVSLFGLESIMSTQSTNDPNSIFHFTVKDAKGQDVDLATYKGKVLLLVNVASKCGMTNSNYVELNQLYGKYKDKGLEILAFPCNQFGEEEPGSNDEIADFVCTRFKSEFPIFDKIEVNGDNASPLYKFLKSGKWGIFGDDIQWNFAKFLVDKDGQVVDRYYPTTSPLSLERDIRKLIGIV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02423 203 ProSitePatterns Glutathione peroxidases active site. 65 80 IPR029759 -
Cca09g02423 203 PRINTS Glutathione peroxidase family signature 63 80 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 PRINTS Glutathione peroxidase family signature 99 115 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 PRINTS Glutathione peroxidase family signature 164 173 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 ProSiteProfiles Glutathione peroxidase profile. 35 203 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 34 202 - -
Cca09g02423 203 ProSitePatterns Glutathione peroxidases signature 2. 102 109 IPR029760 -
Cca09g02423 203 Gene3D Glutaredoxin 34 202 - -
Cca09g02423 203 CDD GSH_Peroxidase 44 196 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 PANTHER GLUTATHIONE PEROXIDASE 34 202 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 PIRSF Glutathion_perox 19 201 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 ProSiteProfiles Thioredoxin domain profile. 39 201 IPR013766 -
Cca09g02423 203 Pfam Glutathione peroxidase 45 153 IPR000889 GO:0004602|GO:0006979
Cca09g02423 203 SUPERFAMILY Thioredoxin-like 44 200 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02423 Cca-Chr9 49593590 49595619 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02423 K00432 - gmx:100808523 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01795 06 33297924 33299838 Cca09g02423 09 49593590 49595619 PCT