Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02417 ATGGCAAACGCAGCGTCCGGAATGGCTGTGCATGACGATTGCAAATTGAAGTTTCAAGAGCTTAAAGCAAAGAGGAGTTACAGGTTCATCGTGTTCAAAATTCAAGAACAACAAGTGGTGGTTGAGAAATTAGGGGACCCCTCCGAAAGTTATGAGGACATGGCCAGTTTTCCTGCTGATGAGTGTCGTTATGCGGTCTATGATTTTGATTTCACAACTGATGAGAACTGCCAAAAAAGCAAGATCTTCTTCATTGCATGGTCACCAGATACCTCAAAGGTGAGGATGAAGATGGTGTATGCAAGTTCCAAGGATAGATTCAAGAGAGAGTTGGATGGCATTCAAGTTGATATGCAAGCAACTGATCCAAGTGAGATGAGCTTGGACCTTGTGAAAGCCCGAGCCATCTAA 411 0.438 MANAASGMAVHDDCKLKFQELKAKRSYRFIVFKIQEQQVVVEKLGDPSESYEDMASFPADECRYAVYDFDFTTDENCQKSKIFFIAWSPDTSKVRMKMVYASSKDRFKRELDGIQVDMQATDPSEMSLDLVKARAI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02417 136 PANTHER ACTIN-DEPOLYMERIZING FACTOR 2-LIKE 1 135 - -
Cca09g02417 136 SMART adf_2 12 136 IPR002108 GO:0003779
Cca09g02417 136 ProSiteProfiles ADF-H domain profile. 5 136 IPR002108 GO:0003779
Cca09g02417 136 Pfam Cofilin/tropomyosin-type actin-binding protein 14 133 IPR002108 GO:0003779
Cca09g02417 136 Gene3D Severin 1 133 IPR029006 -
Cca09g02417 136 CDD ADF_cofilin_like 6 135 IPR017904 GO:0015629|GO:0030042
Cca09g02417 136 PANTHER COFILIN-RELATED 1 135 IPR017904 GO:0015629|GO:0030042
Cca09g02417 136 SUPERFAMILY Actin depolymerizing proteins 3 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02417 Cca-Chr9 49542605 49544764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02417 K05765 - gmx:100779214 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01790 06 33256750 33258005 Cca09g02417 09 49542605 49544764 PCT