Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02414 ATGGCCAAGGTTTACCCTCAGGAACCCTCATCTCCTCAGTGTCTCACATCTGAAAGAGAAACATACACTCTATGGTTGAAATCACTTGTCTTCCACTCCAATGGATGCACAGTTTACGACTCAAATGGTGACATCGTTTATCGAGTTGATAACTACGACAGAAAGGGTAGAAGAGAAGTTAACCTCATGGATCTACGAGGCAAAGTTCTCTGCACCATAAAGAAGAGATTACTAGCTTTTGGATGTTGGGATGGCCACAGATGCATCAATTCTAATTTTGGTAGCCAGGAACAACCATGGTTTCGAGTTAAAAGATGCAATCAAATGATCAAAGGGAAAGTAGCTTGCCAAATTTCTGTGGGGTGTCAGAGGTACAACATAGTAAAAACCAGTGGCAAAACAGAAGCATTTAGAATAGTGAACATGGATGGACAAATAGTTGCCGAGGCAAAGCAAAAACACTCACCCTCAGGAGTTGTACTGAGTAACGATGTTCTAACGTTGGATTTGGCTGCCGGCACAGATCATTCCCTTGTAATGGCTTTAGTGACGGTGTATGGATTGATATTCGGCATAATGTAA 582 0.421 MAKVYPQEPSSPQCLTSERETYTLWLKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGRREVNLMDLRGKVLCTIKKRLLAFGCWDGHRCINSNFGSQEQPWFRVKRCNQMIKGKVACQISVGCQRYNIVKTSGKTEAFRIVNMDGQIVAEAKQKHSPSGVVLSNDVLTLDLAAGTDHSLVMALVTVYGLIFGIM 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02414 193 PANTHER - 2 189 IPR007612 -
Cca09g02414 193 SUPERFAMILY Tubby C-terminal domain-like 11 190 IPR025659 -
Cca09g02414 193 Pfam LURP-one-related 11 185 IPR007612 -
Cca09g02414 193 Gene3D - 11 191 IPR038595 -
Cca09g02414 193 PANTHER PROTEIN LURP-ONE-RELATED 4 2 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02414 Cca-Chr9 49508199 49509297 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02414 - - gmx:100777685 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01787 06 33202196 33203212 Cca09g02414 09 49508199 49509297 PCT