Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01787 ATGTCCTTTGCACCAGAAACATACACCCTTTGGATGAAATCACTTGTTCTCCACTCTTACGGTTGCACCGTCTATGATTCCAATGGTCTCATCGTTTATCGCGTTGATAACTACGACACAAAGGGTAGAAGAGATGTTAACCTTTTGGATCTGCGAGGCACAGTTCTCTGTACCATACACAAGAAACTACTTAGTTTTGGACGTTGGGATGTGTATAGATGTAGCGGTTCTAACTCAGAAGCAGGAGAAAAACCTTGGTTTCAAGTTAAAAGATGTTATAAGATGATGACGGGAAAAGTAACGTGCCAGATTACAGTGGAGTGCCAAAAGTACAGCATAGAGAGATCAATCGGTGGCAAAAGGGCATTTCGAATTGTCGACATAGATGGAGACATAGTTGCCGATGCAAAGCAAAAGCATTCGTCCTCGGGAGTTGTGCTGGGTAACGATGTTCTAACGTTGGATGTGGAGGGCGGCGTAGATCATGCTCTCATAATGGCTTTTGTCACTGTGTTCGGATTAATCTGCCGCAGAATGTGA 540 0.4389 MSFAPETYTLWMKSLVLHSYGCTVYDSNGLIVYRVDNYDTKGRRDVNLLDLRGTVLCTIHKKLLSFGRWDVYRCSGSNSEAGEKPWFQVKRCYKMMTGKVTCQITVECQKYSIERSIGGKRAFRIVDIDGDIVADAKQKHSSSGVVLGNDVLTLDVEGGVDHALIMAFVTVFGLICRRM 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01787 179 Pfam LURP-one-related 4 171 IPR007612 -
Cca06g01787 179 Gene3D - 1 179 IPR038595 -
Cca06g01787 179 SUPERFAMILY Tubby C-terminal domain-like 5 176 IPR025659 -
Cca06g01787 179 PANTHER PROTEIN LURP-ONE-RELATED 4 2 178 - -
Cca06g01787 179 PANTHER - 2 178 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01787 Cca-Chr6 33202196 33203212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01787 - - ccaj:109801616 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01787 06 33202196 33203212 Cca06g01787 06 33202196 33203212 ECH
Cca06g01787 06 33202196 33203212 Cca09g02414 09 49508199 49509297 PCT