Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02413 ATGTTCAGATGGAGGAGTGAGAGACACAGGGTCAAAGCTGTTTTCAAGCTCCACTTCCATGTCACCCAGATAGTGCAATCTGGGGTGGATGCTTTGGTGCTGTCCATAGTTCCAGGGGACATTGGAAAGGTAACTACGAGGCTAGAGAAAGCTGCAGTTCGTGATGGAGTTTGTAGATGGGAGAATCCTGTCTATGAAACAATCAAGTTTGTTCAGGAGCCTAAGACTGGGAAATTCAGTGAGAGAGTGTATCATTTTGTGGTTTCCACGGGGTTATCAAAAGCCAGCTTCTTTGGGCAAGTTTCTATAGACTTTGCTGAGTATGCTGAGGCTACAAAGCCCTCTACTGTCTCTCTTCCCATCAAGAATTCTCATTGTGATGCTGTGTTGCATGTATCAGTCCAGAGACTACAAGAAAATAATGATAAGAGAGAGGACGAGGATTGTGAAGATACCAAACTAAAACCAAATGATAGAAGTTTGAGGACCTACTTAAGCAATGGAGAGATAGATGCAGGCTCTAAAAGTGATTCTTCTGAGGATGTGTCTGCCAAAGCAAACACCAATGGAGCTGAGTTGAGTGCTGATTGTAGGACATCTAGTGGATCTGACATTACAATATCAAGTTCTGATGGCAGCTCTGGACTTGACACTCCCCGAGAACTTGGACTAAGAAATGATGGTATCCACCCCAACAACAATGGTTTTCTTTCGGATGTGAGCCACACTTCGGAGCCCCAAAAACCTTCTGCAAATGCCTCTGCAGCAATATATGATATTCATCAGAGATCACACTGGGACTGGTCAGCTGGTTCAGAACACGGTTTGAGTACAGACCCATCTGATATGGAAATTGAAAGACTCAAGGCTGAGCTTGCTGCTTTGGCAAGGCAGGTCGATGTGTCAGACTTGGAACTACAAACTCTGAGAAAGCAAATTGTAAAGGAAAGCAAAAGAGGACAGGAGCTCTCAAAGGAAATCATTAGCTTGAAAGAGGAAAGAGATGCACTCAAGGTTGAATGTGAGAGTCTCAGATCTTTTCACAAACGAATGGAGGATTCCAAAGTGAGTAAGAGGCCACAATTGGATAGTGGGGATCTTTGTACTCTAGTCGAAGAAATTAGACAAGAATTGAAGTATGAGAAGGAGCTGAATGCAAATCTACAATTACAGCTAAAGAAGACTCAAGAATCTAACGCTGAACTAGTTCTTGCTGTGCAGGACCTGGATGAAATGCTGGAGCAGAAAAATAGGAAAGTTTGTAGTCTTTCAAATAAACATGAACAAGGTAAAAACTCCCATGAGTTAGGGGGAAACCTCTCTAAATGTGAAACGGATGACGACGAAGAACAGAAAGAATTGGAGGAGCTTGTTAAGGAGCACAGCAATGCCAAGGAGACTCACTTACTTGAGCAAAAGATTATAGATCTCTATGGTGAAATAGAGATGTATAGGAGAGATAAAGACGAGTTAGAGATGCAGATGGAGCAGCTTGCATTAGACTATGAGATATTGAAACAGGAAAACCATGACATTGCATATAAGCTGGAACAAAGTGAACTGCAAGAACAATTAAAAATGCAATATGAATGCTCATCTCCTCCTCCTGGTGTTGATCACATTGAATCCCATATTCAGAATCTGGAAAATCAACTCAAGCAACAATCAGAAGAATTCTCAAATTCTCTGGCTACCATCAAGGAACTTGAATCCCAAATCAGCAGATTAGAGGAGGAACTGGAGAAACAAGCCCAGGGATTTGAAGCTGATCTAGACACTGTGACACGTGAAAAAGTTGAGCAGGAGCAAAGAGCCATCCGCGCAGAAGAAGCTTTACGAAACACTAGACATAAAAATGCTAACACTGCAGAGAGGCTCCAAGAAGAATTTAGAAGGCTCTCGACGCAAATGGCCTCTACGTTTGAGGCCAATGAGAAGGCTACCATGAGAGCATTGACAGAAGCAAGTGAACTTCGTGTGCAGAAAAGGCTAGTGGAAGAAATGCTGCACAAGGTCAATAAAGAGCTTCAGTCAGCCAAAGCTGATTATGAGGTAAAACTGAATGAACTTTCCAACAAAATAGACTTGATGACAGCTCGGAAACAACAGATGTTGTTGGAAATTGAGGACAAGTCAAAGCAGCTTGAAAATCAGAAGAAGCATGAGGAACAAGTTAGTAGGGACTTCTCTGAAGAGATCCAGATGCTAAAAGCTGAAAATGAAAGGCTTAAAGTGGAGATTTCAGGCCTCTCTGAGCAAGTAGAACAAAAAGAACTCTTAAGAAATGACTTGGAGCTTATGAAGAAATCATTTGAGGAATCTGAGGCTCGGTTACAGAGTAGAACGATGGAAAGAAATGAGCTGGTGAGTGCGATTGCTTTGTTGAAGAAGGAAGCAGAAAGGTCACTTGATGAGCTAAGAAGGGTGAAGCATCTCAAGGATGAGAAAGAGATGGCAGGTAGAGTCTTGCAGTCAGAGTTAGAAGCACTTAGAGTTCAATATAGTGACTTGAAAAGTTCTCTTATTGAGGATGAGAGTGAAAAAGAAAATCTAAGGAAGCAAGTTTTCGAGCTTAAAGGGGAACTAAAGAAGAAGGATGACGCATTAAGCAACATTGAGAAGAGATTCAAGGATAGCAATGGACGCGCACAGCTCTCTGATGGAACTAAAACCAATTCGAAAAACAAAAAAGGTGCTTCAATTCCTCAGAATTCAAAAGAAATGGCAAGTCTGAGGGACAAAATAAAAACTCTTGAGGGCATGATAAGGTCCAAGGAAAATGCTTTGGAAATGTCAGCTTCTTCATTTTTGGACAAGGAAAGGGAGCTCCAATCCAAAATTGAGGAACTGGAAGACAAAGTGGAGGAATTCAATCAAAGCATTTCTTTGCAAAAGGTTGTTGAGGATAAGAGTATTACTACTTCAAATGACACTACACGCGTGTCAGAAGGAAATGGTGTTGCAGTTTCACTGTTCAATAGTAATGGCAACCTTAGTGAGACTTTAGCCGAATTATCGTTGTTGAAGGAAAGAAACAACTCAATGGAAACGGAGCTGAAAGAGTTACAACAAAGATACTCAGAAATGAGTCTCAAATTTGCGGAGGTAGAAGGTGAAAGACAGAAGCTTGTAATGACTGTACGAAATCTCAAGAATGGCCGCAAGGCCCAATGA 3174 0.4165 MFRWRSERHRVKAVFKLHFHVTQIVQSGVDALVLSIVPGDIGKVTTRLEKAAVRDGVCRWENPVYETIKFVQEPKTGKFSERVYHFVVSTGLSKASFFGQVSIDFAEYAEATKPSTVSLPIKNSHCDAVLHVSVQRLQENNDKREDEDCEDTKLKPNDRSLRTYLSNGEIDAGSKSDSSEDVSAKANTNGAELSADCRTSSGSDITISSSDGSSGLDTPRELGLRNDGIHPNNNGFLSDVSHTSEPQKPSANASAAIYDIHQRSHWDWSAGSEHGLSTDPSDMEIERLKAELAALARQVDVSDLELQTLRKQIVKESKRGQELSKEIISLKEERDALKVECESLRSFHKRMEDSKVSKRPQLDSGDLCTLVEEIRQELKYEKELNANLQLQLKKTQESNAELVLAVQDLDEMLEQKNRKVCSLSNKHEQGKNSHELGGNLSKCETDDDEEQKELEELVKEHSNAKETHLLEQKIIDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHDIAYKLEQSELQEQLKMQYECSSPPPGVDHIESHIQNLENQLKQQSEEFSNSLATIKELESQISRLEEELEKQAQGFEADLDTVTREKVEQEQRAIRAEEALRNTRHKNANTAERLQEEFRRLSTQMASTFEANEKATMRALTEASELRVQKRLVEEMLHKVNKELQSAKADYEVKLNELSNKIDLMTARKQQMLLEIEDKSKQLENQKKHEEQVSRDFSEEIQMLKAENERLKVEISGLSEQVEQKELLRNDLELMKKSFEESEARLQSRTMERNELVSAIALLKKEAERSLDELRRVKHLKDEKEMAGRVLQSELEALRVQYSDLKSSLIEDESEKENLRKQVFELKGELKKKDDALSNIEKRFKDSNGRAQLSDGTKTNSKNKKGASIPQNSKEMASLRDKIKTLEGMIRSKENALEMSASSFLDKERELQSKIEELEDKVEEFNQSISLQKVVEDKSITTSNDTTRVSEGNGVAVSLFNSNGNLSETLAELSLLKERNNSMETELKELQQRYSEMSLKFAEVEGERQKLVMTVRNLKNGRKAQ 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02413 1057 Coils Coil 474 508 - -
Cca09g02413 1057 MobiDBLite consensus disorder prediction 876 909 - -
Cca09g02413 1057 MobiDBLite consensus disorder prediction 160 252 - -
Cca09g02413 1057 MobiDBLite consensus disorder prediction 425 448 - -
Cca09g02413 1057 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1057 - -
Cca09g02413 1057 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 1 1057 - -
Cca09g02413 1057 MobiDBLite consensus disorder prediction 882 907 - -
Cca09g02413 1057 Coils Coil 538 618 - -
Cca09g02413 1057 Coils Coil 371 419 - -
Cca09g02413 1057 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Cca09g02413 1057 Coils Coil 662 777 - -
Cca09g02413 1057 Coils Coil 933 967 - -
Cca09g02413 1057 MobiDBLite consensus disorder prediction 160 216 - -
Cca09g02413 1057 Coils Coil 834 868 - -
Cca09g02413 1057 Coils Coil 998 1039 - -
Cca09g02413 1057 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 9 143 IPR019448 -
Cca09g02413 1057 Coils Coil 908 928 - -
Cca09g02413 1057 Coils Coil 440 467 - -
Cca09g02413 1057 Coils Coil 792 816 - -
Cca09g02413 1057 MobiDBLite consensus disorder prediction 231 251 - -
Cca09g02413 1057 Coils Coil 285 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02413 Cca-Chr9 49496316 49501143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02413 - - gmx:100819574 1731.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01786 06 33182005 33186857 Cca09g02413 09 49496316 49501143 PCT