Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02379 ATGGCCATGCATCGCGAGTCTTGGGCTTTTGTCTTCGGCCTTTTGGGCAACATTATCTCCTTTGGAGTGTTTCTTGCTCCATTACCAACCTTTTATCAAATTTACAAGAAGAAATCAACTGAAGGGTTTCAGTCACTTCCTTATGTTGTTGCACTGTTTAGTGCAATGCTTTGGATTTACTACGCATTCGTCAAGAAGGAAGCTGCACTCCTTCTCATTACCATTAACACGTTTGGAATTGTTGTGGAGTCAATTTACCTTGCAATCTTCCTATTTTATGCTCCAAGGAAGCCTAGGCTTTCGACCATCAAGCTTCTTCTCTTGTTGAATGTGTTTGGATTCGGAGCCATGCTTCTATCAACTCTCTACCTTTCAAAGGGAGCAAAGCGTCTTGCTATCATAGGATGGATTTGCTTGGTTTTCAACATAAGTGTCTTTGCTGCGCCTCTCTTCATTATTAGGCGAGTGATAAAGACGAGGAGCGTGGAATACATGCCCTTTACTTTGTCCATGTTTTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAAAGATTATTACGTTGCTCTCCCAAACACACTTGGGTTTCTGTTCGGCATAATTCAGATGGTGATGTACTTGATATACAGAAACGCCACTCCAGTGGCACTAGAGCCAGTGAAGGCTCAAGAATTGAATGGCCACATCATCGACGTTGTGAAGAGTGGAGCAATGGGCCCGAATCATGCAACTACTGGTGGTGGTGTTGGCAAAGTCTGA 771 0.4332 MAMHRESWAFVFGLLGNIISFGVFLAPLPTFYQIYKKKSTEGFQSLPYVVALFSAMLWIYYAFVKKEAALLLITINTFGIVVESIYLAIFLFYAPRKPRLSTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLKDYYVALPNTLGFLFGIIQMVMYLIYRNATPVALEPVKAQELNGHIIDVVKSGAMGPNHATTGGGVGKV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02379 256 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 250 - -
Cca09g02379 256 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Cca09g02379 256 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Cca09g02379 256 Gene3D - 129 220 - -
Cca09g02379 256 Gene3D - 11 97 - -
Cca09g02379 256 PANTHER RAG1-ACTIVATING PROTEIN 1 4 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02379 Cca-Chr9 49151482 49154091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02379 1 238 Miscellaneous Gene Families AT5G50800 59.833 5.69e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02379 K15382 - gmx:100810946 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02379 09 49151482 49154091 Cca09g02379 09 49151482 49154091 ECH
Cca09g02379 09 49151482 49154091 Cca03g00297 03 4478153 4480575 PCT