Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02377 ATGGCATACCAGTCTAACTGTAATCTTCACTCCGACAGAAGGTACCGCGTCTGGCAAGGCGATAACAAATTTCTTTTGGGAGGGAGGCTTATATTTGGGCCTGATGTGAAACCTATATTCGTATCCATTTTTCTAATTGTCACCCCTGTCGCTGTGTTCTGTGCCATGGTAGCCAGGAAACTCTCAGATCATATTCCTCCTCACGCTGGATGCTCAATAATGCCACTCCTCATTGCTCTCACACTCTTCCGAAACTACAGGTTCTTCTACATGTTTATTTTGTCAGCGACTTTGCTTTGTTTATATGTACATGCCTTTTGCTGGGTCTACATTAGGAGGATGAAGGACTCGGAGGAAATATCAATTTGGAAAGCAATGACCAAAACTCCAGCATCCATTGCGCTAATAATCTACACCGTCATTGGTGTCTGGTTTGTTGGGGGCCTCACTGTTTTCCACACCTACCTCATCTGCACAAACCAGTCTACTTACGAAAACATTAAGTACCCGTGTGACCCACAAGACAACCCATATAACAGAGGGATAATTAACAACTTGAGGGAAGTATTCTGCACTAGAATTCCTCCATCGAAGAACAATTTCAGGTCTAAGGTTCCATGGGAGCCATTTGATTCATATCCCGGGAATATGGAATTAGTAGAGATCAGTTCGGTTTACAAAGAGTCAAACGAGGTGGAAAGTAATTATAAACATGATTTAAGCAATGACAGTGGATTGACCGATAAGTCCCTAGATTTAAGCACGATCGTTCACATAGAAAGAGAGAAGGAACAAGAAAGTAATTCAAGGAGTTACAATGAACCAAAGCAAGAGGAAAAAAGTGATAATAGAGATGGATTTGACAATGAAATAACTCCAGACAGCATAACAGAAATTGAGGAATCAAATTGGGCTGCTGGGCCCAATAACTCAGCCGGTTGCACTATGCATAACGTTATAACTTTTGGAGATCTAATTAAAAGTTTAAACGAGTAA 996 0.4116 MAYQSNCNLHSDRRYRVWQGDNKFLLGGRLIFGPDVKPIFVSIFLIVTPVAVFCAMVARKLSDHIPPHAGCSIMPLLIALTLFRNYRFFYMFILSATLLCLYVHAFCWVYIRRMKDSEEISIWKAMTKTPASIALIIYTVIGVWFVGGLTVFHTYLICTNQSTYENIKYPCDPQDNPYNRGIINNLREVFCTRIPPSKNNFRSKVPWEPFDSYPGNMELVEISSVYKESNEVESNYKHDLSNDSGLTDKSLDLSTIVHIEREKEQESNSRSYNEPKQEEKSDNRDGFDNEITPDSITEIEESNWAAGPNNSAGCTMHNVITFGDLIKSLNE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02377 331 PANTHER S-ACYLTRANSFERASE 83 242 - -
Cca09g02377 331 MobiDBLite consensus disorder prediction 260 291 - -
Cca09g02377 331 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 83 242 - -
Cca09g02377 331 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 11 83 - -
Cca09g02377 331 Pfam DHHC palmitoyltransferase 83 169 IPR001594 GO:0016409
Cca09g02377 331 MobiDBLite consensus disorder prediction 260 295 - -
Cca09g02377 331 PANTHER S-ACYLTRANSFERASE 11 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02377 Cca-Chr9 49114422 49119310 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02377 - - gmx:100788304 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00296 03 4454833 4459603 Cca09g02377 09 49114422 49119310 ECH
Cca09g02377 09 49114422 49119310 Cca09g02377 09 49114422 49119310 ECH