Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02346 ATGGCCTTGCAGGCACCGAGCCTTACCGTCAATGCCGGTCTCCGACGACCCTTGATGAACCCTTTTGCTCTAAAGTCAACCTTCTTCTCTGGTTCCTTCAACTTCAACCTTCACCTTCACCCTATTACTTCCGCACCCCCCAGGATTTCCATGCGCGTCGCTTCCAAACAGGCCTATATCTGTCGCGATTGCGGGTATATTTACAACGACAGGACTCCCTTTGACAAGTTGCCTGATAACTACTTCTGCCCTGTTTGTGGTGCTCCAAAAAGAAGATTTAGGTCATATGCACCGGCTGTCACAAGAGATGCCAATGACACATCTGTTAGAAAGGCACGAAAAGCAGAATTGCAGAGAGATGAAGCAATTGGGAAGGCACTTCCTATTGCAATTGTCGTGGGAATTGCAGTGCTTGCTGGATTATATTTCTATCTCAACAACCAATACTAG 450 0.4733 MALQAPSLTVNAGLRRPLMNPFALKSTFFSGSFNFNLHLHPITSAPPRISMRVASKQAYICRDCGYIYNDRTPFDKLPDNYFCPVCGAPKRRFRSYAPAVTRDANDTSVRKARKAELQRDEAIGKALPIAIVVGIAVLAGLYFYLNNQY 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02346 149 CDD rubredoxin 59 96 IPR024935 GO:0005506
Cca09g02346 149 SUPERFAMILY Rubredoxin-like 56 99 - -
Cca09g02346 149 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 5 149 - -
Cca09g02346 149 Pfam Rubredoxin 59 93 IPR024935 GO:0005506
Cca09g02346 149 Gene3D - 56 95 - -
Cca09g02346 149 ProSiteProfiles Rubredoxin-like domain profile. 56 96 IPR024934 GO:0005506
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02346 Cca-Chr9 48751562 48752936 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02346 - - gmx:100812204 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02346 09 48751562 48752936 Cca09g02346 09 48751562 48752936 ECH
Cca09g02346 09 48751562 48752936 Cca03g00268 03 3931537 3932808 PCT