Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02312 ATGGGGGGTCTTTGTTCAAAGTCTGCCAAAGGTGACAAGGTGTTTGCCAAGGCAGATGGACATTCTGATAACCATAAATCTGATGGTAGGAACCACAAGTCCACCACCATGCCTAGTGATTTGGCAAGTGCAAGGGATGGAGTGGACAAGAAACAGCAACTAGCAGATGGTGGTGGTGCACCTGCAGGAACTGGTTCTGAAGAATTCTATGATGGAATCCCACGGTTTAATGATTCTTTTCCCCAAAAATCTAGGTCAGGAAGATCAAAGGTCTCAGAGGTGAGTTTACGCCTGGGTAGAGCTGGCACTATTGGAATTGGGAAGGCAGTTGACGTTTTGGACACTCTTGGGAGCAGCATGACAAATTTAAGCGGTGGTGGGTTTGTATCTGGAGCTACGATGAAGGGGAATGAAATTGGTATTTTAGCATTTGAGGTTGCAAACACTATTGTAAAGGGTTTTAGTCTTATGGAATCTCTTTCAACAAAAAGTATTAAACATTTAAAGGAAGAGGTGCTTCCATTAGAGGCTGTACAAGATTTAGTATCAAAGGATACGGATGAACTTCTAAGGATTGTTGCTGCAGACAAGAGGGATGAGTTGAAAGTCTTTTCTGATGAGGTAATTCGTTTTGGAAATCGCTCAAAGGATCCTCAGTGGCACAACTTGGACCGATACTTTGAGAAAATTATCAGAGAACTTAATTCTCAAAGACAATCAAAGGAGGAGGCAGAATTATTAATGCAACAATTGATGACTTTGGTTCAGTATACAGCTGAATTATACCATGAGTTACACGCTTTGGATAGATTTGCGCAAGATTATCAGCATAAGCAGGAAGAGGAGGATAATTCAGGTCCAGCTCAAAAGGGTGATGGCCTTTCAATTTTGAGGGCAGAACTTAAAAGTCAAAAGAAGCAAGTTAAACATTTGAAAAAAAAGTCACTCTGGTCCAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAGAGATAGTCCAATTTTTGCATTTGGAGATAAACAATGCCTTTGGCACTGCAGATGACCATAAACCATTAATCCGAACTGTCAGCAGTCGCCAAAAATTAGGTCCTGCAGGCCTTGCCTTGCATTATGCTAATATAGTGCTCCAAATTGATACTCTTGTTGCTAGATCTAGTTCTATGCCTTCAAATACAAGGGATACATTGTATCAGAGCTTACCTCCTAATATAAAATTAGCTTTGCGTTCCAAAATACCAAGCTTTCATGTTGTAAAAGAGCTCACCATATCAGATATTAAACAAGAGATGGAGAAAACATTGCATTGGCTGGTTCCGATTGCTACAAACACAGCAAAAGCTCATCATGGTTTTGGTTGGGTAGGAGAGTGGGCAAACACTGGCTCTGAGCTTAATAAAAAGACCGTGAAGACTGATGTGATGCGGATCGAAACGCTTCACCATGCTGATAAAGACAAAGTAGAAAATTATATTCTTGAACTTCTCCTATGGCTTCACCGCTTGGCTGTCAAAATTAAAGCCGGCATTGATGCAGAAACAAGGTCTCCCTTAAAGTCCCATGTTGGCACTGCCCTGCAAACATCAAATCAACAATCTACAAATGCTTTAACGACTGACGAGCAGAAAATGCTGCAAGATGTTAGTAATAAAATTCGCTTAAGAGGGAACAGTAAAAGCTTGGACTTTGACAGTGTGAAGATTGGCTTGACAGATAATGGCAGACTTACAAAGAGTAGCAGTTATTCATCAACAAGTAGAAGCAAGGAACTATCTTTCAATAGAATTATGTCTAAGCTTCCTGTGATTGATTTTGGTATTGACAAAAAGAGAGCATTGGATGTGATTGACAGACTAGAAGTGGCCAGATAA 1869 0.4056 MGGLCSKSAKGDKVFAKADGHSDNHKSDGRNHKSTTMPSDLASARDGVDKKQQLADGGGAPAGTGSEEFYDGIPRFNDSFPQKSRSGRSKVSEVSLRLGRAGTIGIGKAVDVLDTLGSSMTNLSGGGFVSGATMKGNEIGILAFEVANTIVKGFSLMESLSTKSIKHLKEEVLPLEAVQDLVSKDTDELLRIVAADKRDELKVFSDEVIRFGNRSKDPQWHNLDRYFEKIIRELNSQRQSKEEAELLMQQLMTLVQYTAELYHELHALDRFAQDYQHKQEEEDNSGPAQKGDGLSILRAELKSQKKQVKHLKKKSLWSRSLEEVMEKLVEIVQFLHLEINNAFGTADDHKPLIRTVSSRQKLGPAGLALHYANIVLQIDTLVARSSSMPSNTRDTLYQSLPPNIKLALRSKIPSFHVVKELTISDIKQEMEKTLHWLVPIATNTAKAHHGFGWVGEWANTGSELNKKTVKTDVMRIETLHHADKDKVENYILELLLWLHRLAVKIKAGIDAETRSPLKSHVGTALQTSNQQSTNALTTDEQKMLQDVSNKIRLRGNSKSLDFDSVKIGLTDNGRLTKSSSYSSTSRSKELSFNRIMSKLPVIDFGIDKKRALDVIDRLEVAR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02312 622 MobiDBLite consensus disorder prediction 12 33 - -
Cca09g02312 622 Pfam Protein of unknown function (DUF668) 362 446 IPR007700 GO:0045927
Cca09g02312 622 MobiDBLite consensus disorder prediction 1 92 - -
Cca09g02312 622 PANTHER OS01G0873900 PROTEIN 2 622 IPR045021 GO:0045927
Cca09g02312 622 Coils Coil 294 314 - -
Cca09g02312 622 PANTHER DUF668 FAMILY PROTEIN 2 622 - -
Cca09g02312 622 Pfam Domain of unknown function (DUF3475) 141 197 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02312 Cca-Chr9 48403167 48410697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02312 - - gmx:100804075 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02312 09 48403167 48410697 Cca03g00234 03 3432191 3444373 PCT