Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00234 ATGGCAGGGGGTTCAAATTCAAAGAAGCCTATCAATAGAGGCACCGATTCCACAAACACACAGGAAAGGAATAAACAGACGCAAGTGCAAGAACATGCTACACTCCAGGACGGACATTTCCACGATGTAATCCCATACTTTGTCGATGATTGCTCTCTGCCCAAGTCTAGGTCAAAGGTCTCAGAGGTGAGTTTATGCTTCGGTAGAGCTGGTACTAATCGATTTGAGAAGAAAGTATATATTTTGGAAACTCTTGGGAGTAGCATGACAAATTTAAATACTAGTGGTGGATTTGTTTCTGGAGCTGCGATAAAGGGGAATCAAATTTCTATCTTAGCATTTGAGGTTGCGAACACAATTGTCAAAGGTTTTAATCTACAGCAATCTCTTTCCTCAGAAAGTATTAGGCATTTAAAAGAAGAGGTGCTTCTTTCAGAGGCTGTACAAGAGTTAGTATCAGAGGATATGGATGAACTTCTTAGGATTGTTGCAGCAGACAAGAGGCAGGAATTGAAAGTTTTTTCTGATGAGGTGGTTCGGTTTGGAAATCGTTCAAAGAATCCTCAATGGCACAACTTAGACCGTTATTTTGAGAAGATTAGCAGAGAATTAAATGCTCCAAGACTGTCAAGAGATGAGGCAGAATCAATCATGCAACAATTGATGACTTTGGTTCAGTTTTCAGTTGAAATGTACCATGAATTGAATGCTTTGGATACATTTGAACAAGATTTTCAGCGCAATATCTCTCTTCATCATACAGGTGATAACCTTGCGTTGTTAAGGGTGGAAATTAAAAGTCAAAGGAAGTACATTAGACATTTAAAGAAAAAATCACTCTGGTATAGAAGTTTAGATGAGGTTGTGGAGAAGCTTGTAGACTTTGTCCATTTTTTGCATTTGGAGATAAACAATGCCTTTGGTAGAGCAGACTGCCACAAACCATTAGCTGGAAACTTGAGCAATTGCCAGAGATTGGGCCCTGCAGGCCTTGCTTTGCATTATGCAAATATAGTGCTTCAAATTGATACTCTTGTAGCCGGGACTACAATTGCAAATACAAAGGATGCATTATATCAAAGTCTGCCTCCTAAGATAAAATTAGCTCTGCGTTCCAAATTACCATCCCTCCGTGTTGTAGAAGAGTTAACTGTACCAGTTATCAAATATTGGATGGAGAAATTATTACATATTTTGGTTCCCATGGCCACTAATACATCCAAAGCACATCATAGATTTGGTTGGGTAGGGGAGTGGGCAAACACAGGCTATGAGGTAAACAGGAAGAGTGATATAATGCGGATTGAGACATTCCAGCATGCAGACAAAGAAAAAGTGGAATATTATATTCTTGAACTTCTCCTATGGCTTCATCGCTTGGCCATCAGAAGTAAGGCTGACAGTGATGCTGGCTAA 1416 0.3962 MAGGSNSKKPINRGTDSTNTQERNKQTQVQEHATLQDGHFHDVIPYFVDDCSLPKSRSKVSEVSLCFGRAGTNRFEKKVYILETLGSSMTNLNTSGGFVSGAAIKGNQISILAFEVANTIVKGFNLQQSLSSESIRHLKEEVLLSEAVQELVSEDMDELLRIVAADKRQELKVFSDEVVRFGNRSKNPQWHNLDRYFEKISRELNAPRLSRDEAESIMQQLMTLVQFSVEMYHELNALDTFEQDFQRNISLHHTGDNLALLRVEIKSQRKYIRHLKKKSLWYRSLDEVVEKLVDFVHFLHLEINNAFGRADCHKPLAGNLSNCQRLGPAGLALHYANIVLQIDTLVAGTTIANTKDALYQSLPPKIKLALRSKLPSLRVVEELTVPVIKYWMEKLLHILVPMATNTSKAHHRFGWVGEWANTGYEVNRKSDIMRIETFQHADKEKVEYYILELLLWLHRLAIRSKADSDAG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00234 471 PANTHER OS01G0873900 PROTEIN 18 471 IPR045021 GO:0045927
Cca03g00234 471 Pfam Protein of unknown function (DUF668) 325 407 IPR007700 GO:0045927
Cca03g00234 471 Pfam Domain of unknown function (DUF3475) 111 167 IPR021864 GO:0045927
Cca03g00234 471 MobiDBLite consensus disorder prediction 1 31 - -
Cca03g00234 471 PANTHER DUF668 FAMILY PROTEIN 18 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00234 Cca-Chr3 3432191 3444373 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00234 - - gmx:100779607 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02312 09 48403167 48410697 Cca03g00234 03 3432191 3444373 PCT