Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02311 ATGAGCTCCAGTAATTTGACGGGGTTCGTGTTGGCTGTGGTTTCCAGCGCTTTCATTGGCTCCAGCTTCATCATCAAGAAAAAGGGCCTTCAACTCGCCAGTGCCAATGGCCCACGTGCCGGTGTTGGTGGCTATGGTTACTTGCTTCAACCCCTCTGGTGGGTCGGAATGATTACCATGATTGTCGGAGAGATAGCTAATTTTGTAGCATACATTTATGCCCCTGCTGTTCTTGTTACTCCACTCGGTGCTTTGAGTATCATTGTTAGCGCTGTCTTGGCACATTTTCTCTTGAAGGAGAAACTGCAGAAAATGGGCATGTTGGGGTGTCTTCTGTGCATTGTGGGATCCACTATAGTTGTGCTCCATGCGCCCGAAGAGAAGTCTCTTACTTCTGTACAAGAAATATGGGAATTGGCCATTCAACCTGCATTCGTCTCGTACACTGCCTCTGCAATTGCTGTGACATTGTTCTTGGTTTTGTACTGTGCTCCCCGCTGTGGCCAGACTAATATTATGGTTTATACTGGAATATGCTCAATAGTTGGGTCCTTGACTGTCATGAGTGTAAAAGCAATTGGCATTGCGATAAAACTTACACTGGAAGGTGCAAACCAGGCTTTCTACTTTCATACATGGATTTTTACAATGGTTGCTGTCAGCTGCATCATTGTCCAACTAAATTACCTTAATATGGCATTGGATAATTTTAATACCACAGTTGTTTCTCCAATCTATTATGCATTGTTCACATCTTTTACAATATTGGCCAGTGCAATTATGTTTAAGGACTATTATGGTCAAAGTATAAGCAATATTGTGTCAGAGCTATGTGGTTTCATCACTATTTTATCTGGAACGACTATATTGCACAGTACAAGAGAACCAGAGCCTCCAGCCATTTCAGATTTATATACACCATTGTCTCCAAAAGTGTCATGGAGGCTAAACTGCAAGAGGCAGAGAGGAGACAgtataatggtgaGCCGTGCAGACGATGATTTGGACATTCGGTCGCTGATCCGCAATCGGCTGGCGACGACGACGGGGAACCCTGTTCCGGCTGACGCCCGTGCGGCGGGCCATACATCTCAACCTCAAGGTGGGGGGTCGAGTCCCACTGCTAGGgcggctcggcaagcgcgctactttggtgacttcccctccgacttccagctggacatgaccaaggacttcttccaggggaagttggtggacttaacgtctatcccgccggatcagcagccggacgaagcggctccggttcgggcggccaggctggacgacgagacggcctacgaggaaggtgccccggaagacggccccgtgcagggtgaggcggaggtccagtcttga 1356 0.3761 MSSSNLTGFVLAVVSSAFIGSSFIIKKKGLQLASANGPRAGVGGYGYLLQPLWWVGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFLLKEKLQKMGMLGCLLCIVGSTIVVLHAPEEKSLTSVQEIWELAIQPAFVSYTASAIAVTLFLVLYCAPRCGQTNIMVYTGICSIVGSLTVMSVKAIGIAIKLTLEGANQAFYFHTWIFTMVAVSCIIVQLNYLNMALDNFNTTVVSPIYYALFTSFTILASAIMFKDYYGQSISNIVSELCGFITILSGTTILHSTREPEPPAISDLYTPLSPKVSWRLNCKRQRGDSIMVSRADDDLDIRSLIRNRLATTTGNPVPADARAAGHTSQPQGGGSSPTARAARQARYFGDFPSDFQLDMTKDFFQGKLVDLTSIPPDQQPDEAAPVRAARLDDETAYEEGAPEDGPVQGEAEVQS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02311 451 Pfam Magnesium transporter NIPA 5 295 IPR008521 GO:0015095|GO:0015693|GO:0016021
Cca09g02311 451 PANTHER MAGNESIUM TRANSPORTER-RELATED 1 320 - -
Cca09g02311 451 MobiDBLite consensus disorder prediction 348 377 - -
Cca09g02311 451 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 123 - -
Cca09g02311 451 MobiDBLite consensus disorder prediction 429 451 - -
Cca09g02311 451 PANTHER UNCHARACTERIZED 1 320 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02311 Cca-Chr9 48371647 48394201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02311 K22733 - gmx:100799756 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02311 09 48371647 48394201 Cca03g00232 03 3405448 3411105 PCT