Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02260 ATGGATCTTTTGCTAGTTCCTTACTCATTGGGTCATAGTCTGAAAATAATTCAGTGGCCACCATTTTTGCTTGCGGGCAAGATTACTGTAGCACTGGATATGGCAACTCAGTTTCGAGGGAAGGACTCTGATCTTTGGAAGCGCATATGTGCAGATGAAAATATGAAATGTGCTGTGATTGAATGCTATGAATCCTTTAAACATGTTCTACATGATCTAGTGACAGGAGAAACTGAAAAAAGTATAATTTCCATCATCATTAAAGAAGTCGAGAGCAACATCTCAAAGAATACACTTCTTACAAATTTCCGTATGGGCTTTTTACCCTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAAGTGGAGATGCATCCAAGCGGGGTACAGTGGTGGTCTTGCTGCAAGACATGCTAGAAGTGGTTACCGATATGATGGTGAATGAAATCAGCGAATTGGCAGAACTTAATCAAAGTAGTAAGGATACAGGACGACAAGTTTTTGCTGGTACAGAGGCAAAACCTGCTATACTGTTCCCTCCTGTGGTTACAGCACAATGGGAGGAACAGATAAGACGGCTTTATCTACTCTTGACTGTAAAGGAATCTGCCATTGATGTTCCAACAAACAGCGAAGTACGCAGAAGGGTTGCATTCTTTACCAATTCTTTGTTTATGGATATGCCACGTGCTCCTCGAGTACGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTATATTCTAAGAATGACATTGAGGTTGATAATGAAGATGGCGTGTCAATCATATATTACCTTCAAAAGATCTTCCCTGATGAATGGAATAACTTCTTGGAGCGACTTGATTGTAAGAAAGATAGCGAGGTATGGGAAAAAGATGAGAATATATTACAGCTACGTCACTGGGCCTCATTAAGAGGACAAACTCTTTGTAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCAATAAAGCTCCAGGCATTTCTTGATATGGCTTCTGAAAAGGAGATACTCGACGGCTACAAAGCTATTGCAGTTCCTTCTGAGGAAGAAAAAAAGAGTCATAGATCCTTATATGCCAGTTTAGAGGCTATGGCTGATATGAAATTCACATACGTTGCTACCTGTCAGAACTATGGGAATCAGAAGCGCAGTGGAGACCGCCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAAGTTGAAGAAAGAGAAGGTGGAAAAGTACAGAAAGTTTATTATTCTGTATTGGTCAAAGCTGTGGATAATCTTGACCAAGAAATATATCGGATAAAGCTTCCGGGTCCGGCAAAGTTAGGAGAAGGGAAGCCAGAAAACCAAAATCATGCCATCATTTTTACTAGAGGGGAAGCTCTTCAGGCTATTGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGTAACCTTCTGGAAGAATTTGATGAGGATCATGGAGTGCGCCCACCCACCATACTAGGTGTCCGTGAGCATATTTTCACCGGAAGTGTCTCTTCCTTGGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCACTAAAGGTTCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACTTTACCCGTGGAGGAATCAGCAAGGCTTCTTGTGGCATCAATCTGAGCGAGGATATATTTGCTGGATTCAACTCAACACTAAGACGTGGAAATGTGACTCATCATGAGTATATCCAAGTTGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGCAATGGAGAGCAGATAATGAGCAGGGATATCTACCGACTGGGGCATCGATTTGACTTTTTCCGCATGCTATCATTTTATTTTACAACTGTTGGATTTTATGTTAGCTCAATGTTGGTGGCTATTACGGTTTATGCTTTCCTGTATGGCAGACTTTACCTGTCATTGAGTGGATTAGAATCTGCTATAGTTAAGATTGCTAGGAAAAAGGGTGATGATCCATTAAAGGCTGCAATGGCTTCCCAATCTGTTGTTCAAATAGGTCTTCTGATGACTCTGCCCATGGTCATGGAAATTGGACTAGAGAGAGGATTCAGAACAGCTCTAAGTGAGATCATAATAATGCAGCTTCAGCTAGCACCTGTTTTCTTCACCTTCTCACTAGGGACTAAGATGCACTATTTTGGGCGCACTCTTCTGCATGGAGGAGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGTCATGAAAAGTTTGCAGAAAATTACAGAATGTATTCTAGGAGTCACTTTGTAAAAGGGTTAGAGCTAGCTATACTGCTCATATGTTATAAGCTTTATGGAGCAGCAGCTCCTGGTTTAACATCATATGGCCTTCTCTCAATATCAATGTGGTTTTTGGTATGTTCTTGGTTGTTCAGTCCTTTCCTTTTTAATCCATCCGGATTTGAGTGGCAGAAGATAGTTGAGGATTGGGATGATTGGTCAAAATGGATAAGTTGTCGAGGAGGTATTGGTGTTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAACAGGAGCATCTGCAGCACACTGGGATTTGGGGGAGGATTTGGGAGGTCATTCTTTCCCTTCGTTTCTTTCTCTATCAGTATGGGATTGTGTATCATCTACATGTGGCTAGAGGTGACAAGAGCATCATGGTTTATGCTCTGTCCTGGCTAGTCGTAGTAGCTGTCATAGTCATCTTGAAGATAGTGTCAATGGGTAGAAAGACGTTCAGTGCTGATTTCCAGCTGATGTTTCGTCTCCTCAAAATGCTTATGTTTATTGGAATCGTTGTTATTCTGGTCTTGATGTTTACTCTACTTAGTCTCACAGTTGGAGACATCTTTGTGAGTCTCCTAGCCTTTATGCCGACAGGTTGGGCATTTATACAGATAGCTCAAGCATGTAAGCCATTGGTGAAGGGAATTGGAATGTGGGGGTCTGTGAAAGCTTTATCAAGAGGGTATGAATACGTGATGGGAGTGGTAATCTTTGCACCAGTTGCCATATTAGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGATTGCTATACAACCAAGCTTTCAGCCGAGGGCTTCAAATCCAGCGCATTCTTACTGGTGGCAAGAAGAAGGCATAA 3264 0.4173 MDLLLVPYSLGHSLKIIQWPPFLLAGKITVALDMATQFRGKDSDLWKRICADENMKCAVIECYESFKHVLHDLVTGETEKSIISIIIKEVESNISKNTLLTNFRMGFLPSLCKKFVELVEILKSGDASKRGTVVVLLQDMLEVVTDMMVNEISELAELNQSSKDTGRQVFAGTEAKPAILFPPVVTAQWEEQIRRLYLLLTVKESAIDVPTNSEVRRRVAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDIEVDNEDGVSIIYYLQKIFPDEWNNFLERLDCKKDSEVWEKDENILQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMASEKEILDGYKAIAVPSEEEKKSHRSLYASLEAMADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLVKAVDNLDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFDEDHGVRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGISKASCGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQIMSRDIYRLGHRFDFFRMLSFYFTTVGFYVSSMLVAITVYAFLYGRLYLSLSGLESAIVKIARKKGDDPLKAAMASQSVVQIGLLMTLPMVMEIGLERGFRTALSEIIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGLELAILLICYKLYGAAAPGLTSYGLLSISMWFLVCSWLFSPFLFNPSGFEWQKIVEDWDDWSKWISCRGGIGVPSNKSWESWWDEEQEHLQHTGIWGRIWEVILSLRFFLYQYGIVYHLHVARGDKSIMVYALSWLVVVAVIVILKIVSMGRKTFSADFQLMFRLLKMLMFIGIVVILVLMFTLLSLTVGDIFVSLLAFMPTGWAFIQIAQACKPLVKGIGMWGSVKALSRGYEYVMGVVIFAPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILTGGKKKA 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02260 1087 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1086 - -
Cca09g02260 1087 PANTHER CALLOSE SYNTHASE 5 1 1086 - -
Cca09g02260 1087 Pfam 1,3-beta-glucan synthase component 209 296 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cca09g02260 1087 Pfam 1,3-beta-glucan synthase component 300 908 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02260 Cca-Chr9 47821380 47828419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g02260 1 1085 Glycosyltransferase AT1G05570 62.128 0.0 1423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02260 K11000 - gmx:100779472 2046.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02260 09 47821380 47828419 Cca09g02260 09 47821380 47828419 ECH
Cca03g00166 03 2563012 2578994 Cca09g02260 09 47821380 47828419 PCT