Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00166 ATGTCGAGTCTGGATGCGGCGCCGCACGCGCTGAGTCGGAGGCCGTCGAGGAGCGCCTCCACGACCTTCTCCACGGAGGTTTTCGACAACAACGTCGTTCCATCTTCACTCGCCTCCATCTCGCCGATTCTCCGAGTCGCCAATGAGATCGAAAGCGAGCGCCCTAGGGTTGCATATCTATGTCGGTTCTATGCTTTCGAGAAGGCGCATCGGTTGGATCAGAGCTCCAGCGGGCGCGGCGTGAGGCAGTTTAAGACGCTGCTGCTGCAGCGATTGGAGAGGGACAATGGAGCCAGTCTTGCCGCGCGTGTTAAGAAGACAGACGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATGAGCATTATGTCAGAACTCTTGACCAAGGAGAGCGGGCAGACAGAGCACAGCTCGGGAAAGCTTACCAGACCGCCGGGGTGCTTTTTGAAGTGCTTTGTGCCGTTAACAAGACTGAGAAGGTCGAAGAAGTAGCTCCTGAGATCATTGCAGCTGCTAGAGATGTCCAGGAAAAGACGGAGATTTATGCACCTTTTAACATTCTTCCATTGGACTCTGCCGGGGCTTCTCAGCCTATTATGCAGCTTGAAGAGATTAAGGCAGCCGTTTCTGCATTCTGGAATACTCGTGGCCTGAATTGGCCAAGTTCATTTGAGCCATCAAGGCAGGGAACTGGAGATTTGGATTTGCTTGATTGGCTTAGAGCCATGTTTGGGGACAACGTCAGGAACCAGAGAGAGCATTTGATTCTGCTTCTTGCCAACTCTCACATAAGGCTACACCCCAAACCCGAGCCTCTTAACAAGGCATGTAGCTATCTCTTGCATTTTACTCTTGATGATCGTGCCATTGATGCAGTGATGAGTGATCTGTTTAAGAATTACAAAACATGGTGCAAATTTTTGGGACGAAAACATAGTTTACGACTCCCTCAAGGTAAGCAAGAGATACAACAAAGGAAGTTACTTTATATGGGCCTGTATCTTCTTATATGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAGTGTCTATGTTACATATTTCATAACATGGCACATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATAGTTACCGGTGAAAACATCAAACCTTCTTATGGTGGTGATGATGAGGCATTCTTGCGCAAGGTTATAACTCCCATATACCGAGTAATTGAAAAGGAAGCCAAGAAGAGCAGAAATGGAACAGCTCCTCATTCATCCTGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCATCTGATTGTTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTTTTTAGATCAACATTTAATTTAACACAGGGAAGAAATGGTGCTCAGAGAACATCTGGAAGAACTGGAAAATCAAATTTTGTTGAGACCCGGTCATTCTGGAACATCTTCCGCAGTTTTGATCGTCTTTGGACATTCTATCTACTGGGTTTGCAGGTGATGTTCATTATTGCCTGGGAAGGGATTTCAGTGTTGGATATCTTTCAGAAACATGTCTTGTATAATCTCTCTAGCATATTCATTACAGCAGCCATTCTGCGCTTACTTCAAAGTATCTTGGACCTGGCTTTGAACTTTCCAGGCTATCACCGTTGGAGATTCACTGATGTGCTACGAAATATTCTCAAAGTCATTGTTAGTCTTTTTTGGGTTATTGTTCTTCCACTCTTCTATGTGCATTCCTTCAAGGGTGCCCCTGAGTTTGTCAAGAATCTGCTTTCCTTTCTTCATCAAATAAAGGGGATTCCAGCATTCTATATGTTGGCAGTTGCAGTGTATCTGCTTCCAAATATATTAGCAGCTGTTCTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATTGTTAGATTTTTCTTATGGTGGTCACAGCCAAGAATCTATGTTGGAAGAGGAATGCATGAGAGTCAATTTGCTCTCCTAAAATACACTCTTTTCTGGGTGATTCTTTTGGCTGCTAAATTTTCATTCAGCTTTTTTTTCCAGATCAAACCTCTAGTTCAGCCAACTAAGGACATAATGAGCATTCGGCATGTTGATTTTGGTTGGCATGAAGTTTTCCCCAATGCTCAACATAACTATGGTGCAGTTATTGCACTTTGGGCCCCTGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATTCCATCTTCTCAACTATTTGTGGTGGTGTTATCGGTGCCTTTGATCGTCTAGGAGAGATACGCACACTAACCATGCTAAGATCACGGTTCCAGTCATTGCCTGGTGCATTCAACACATACTTGGTTCCTACTGACAAGAGACATAAGAAAAAATTCTCTCTCTCGAAGCGCTTTGCCGAGATTTCTGCAAGCAAAAGAAGTGAAGCTGCTAAATTTGCTCAACTATGGAATGAAATTATTTGCAGTTTCCGTGAGGAAGATATCATAAGTGATAGGAAAGGCCTCAGAGCCAAACTCTTTAGTTGCTTTATGGATCTTTTGATGGTTCCATACTCATCGGATCCCAGCTTGAAAATTATTCAGTGGCCACCATTTTTGCTTGCAAGCAAGATTCCTGTAGCAGTGGATATGGCAGCTCAATTTCGAGGAAAGGACTCTGATCTTTGGAAGCGCATATGCGCAGATGAATATATGAAGTGTGCTGTGATTGAATGCTATGAATCTTTTAAAAATGTTCTGCATGCTTTGGTAGTAGGAGAAGCTGAAAAAAGGACAATCTCTGTCATCATTAAGGAAGTTGAAAACAGCATCTCTAAGAATACACTTCTTGCAAATTTCCGAATGGGGTTTTTGCCTTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATATTGAAAGGTGCAGATTCATCCAAGCAAGGTACAGTTGTGGTATTATTGCAAGACATGTTAGAAGTTTTTACACGTGATATGATGGTAAATGAGATCAGTGAATTGGCAGAACTTAATCATAGTAGTAAGGACTCTGGAAGGCAACTTTTTGCTGGTACAGATGCAAAACCGGCTGTACTATTCCCTCCAGTGGTTACAGCACAATGGGAGGAACAGATTAGACATCTTTATTTACTTTTGACGGTGAAGGAATCTGCCATTGAGATTCCAACTAACCTTGAAGCACGTAGAAGGATTGCATTCTTTACTAATTCATTGTTCATGGATATGCCGCGTGCTCCACGAGTCCGTAAAATGCGATCATTCAGTGTCTTGACTCCATACTACAGTGAAGAGACTGTCTATTCGAAGAATGACCTTGAGGTTGAAAACGAAGATGGTGTGTCAATCATATATTACCTGCAAAAGATCTTCCCTGATGAATGGAATAACTTCATGGAACGACTTGATTGTAAGAAAGATAGTGAGATATGGGAGAATGATGAGAACATATTACAGCTACGTCACTGGGCCTCATTACGAGGACAAACTCTTAGCAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCTATTAAGCTTCAGGCTTTTCTTGATATGGCAAATGAAAAGGAGATACTTGGGGGTTATAAAGCTGTTACCGTCCCATCTGAGGAAGATAAAAAGAGCCATAGATCCTTGTATGCCAATTTAGAGGCCATTGCTGACATGAAATTCACATATGTCGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGCGGAGACCGCCATGCAACAGACATCCTTAATTTGATGGTTAACAATCCTTCACTTCGTGTGGCTTATATTGATGAAGTCGAAGAAAGAGAAGGAGGAAGAGTACAGAAAGTTTATTATTCTGTACTGATCAAAGCTGTGGACAATCTTGACCAGGAAATATTTCGAATAAAACTGCCGGGTCCAGCAAAGTTAGGAGAAGGGAAGCCTGAAAATCAAAATCATGCCATTGTTTTTACAAGAGGTGAAGCTCTTCAGACTATAGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGGAACCTTTTGGAAGAGTTTAGTGAAGATCATGGGGTGCGACGACCTACAATATTAGGTGTCCGTGAGCACATCTTTACTGGCAGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCCCTGAAGGTGCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATAACTCGTGGAGGAATTAGCAAGGCTTCTCGTGGCATCAATTTGAGCGAGGATATTTTTGCTGGATTCAACTCAACACTAAGACGTGGAAATGTTACTCATCATGAATATATCCAATGTGGAAAGGGTAGAGACGTGGGGCTCAATCAAATCTCACTTTTTGAAGCAAAAGTGGCTTGTGGTAACGGAGAGCAGATATTAAGCAGAGATATCTACAGGCTGGGGCATCGTTTTGACTTTTTCCGCATGCTATCATTTTATTCCACGACCATTGGATTTTATATAAGCTCAATGATTGTGGCTCTCACTTGTTATGTATTCCTGTATGGCAAACTGTACCTATCTTTGAGTGGATCTGAGGCTGCAATAGTAAAGTTGGCTAAGAGAAAGGGAGATGAAGCACTAGAGGCAGCATTAACTTCACAATCTCTTGTTCAAATAGGACTTCTAATGACTTTGCCCATGTTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTATAGGTGAACTTATAATAATGCAGTTGCAGCTAGCACCTGTTTTCTTCACTTTCTCACTAGGGACAAAGCTTCACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTTGTTCGCCATGAGAAGTTTGGTGAAAATTACAGGTTGTACTCTAGGAGTCACTTTGTAAAAGGGCTTGAGCTCACAATGTTGCTCATATGTTATAAGATTTATGGAGCGGCAACACCTGATTCAACATCATATGGCTTTCTCTCATGGTCAATGTGGTTTTTGGTCTGTTCTTGGTTGTTTGCTCCTTTCCTTTTCAATCCATCAGGGTTTGAATGGCAGAAGATAGTTGAGGACTGGGATGATTGGAAAAAGTGGATAAGTAGTCGAGGTGGTATTGGTGTTCCTGCAAACAAGAGTTGGGAATCATGGTGGGATGAGGAACAAGAGCATCTGCAGCACACTGGGTTTCTGGGGCGGACATGTGAAGCTATTCTTGCCCTGCGTTTCTTTATCTATCAATATGGAATTGTGTATCATCTCCGTGTAGCCAGAGGTGACAAGAGCATCCTGGTTTATGCTCTGTCTTGGATAGTGATAGTAGCTCTCATGGTTATCTTTAAGATTGTGTCCATGGGTAGAAAGCAGTTCAGCGCAGATTTCCAGCTGATGTTTCGTCTTCTCAAATTGTTTCTGTTCATTGGAGCCATTGTTGCTCTAGGCTTAATGTTTACACTGCTGAATCTCACAGTTGGAGACATCTTTGCGAGCCTCCTAGCCTTTTTGCCAACAGCATGGGCACTTGTACAGATAGCACAAGCATGCAGGCCATTCGTGAAGGGCATTGGAATGTGGGGGTCTGTCAAAGCTGTAGCAAGGGGCTTTGAATACCTTATGGGAGTGGTTATTTTTGCACCAGTGGCCATATTGGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTGCTGTTCAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGCGGCAAGAAGCATAAGTAG 5793 0.43 MSSLDAAPHALSRRPSRSASTTFSTEVFDNNVVPSSLASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNGASLAARVKKTDAREIQAYYQQYYEHYVRTLDQGERADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQPIMQLEEIKAAVSAFWNTRGLNWPSSFEPSRQGTGDLDLLDWLRAMFGDNVRNQREHLILLLANSHIRLHPKPEPLNKACSYLLHFTLDDRAIDAVMSDLFKNYKTWCKFLGRKHSLRLPQGKQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAHELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYRVIEKEAKKSRNGTAPHSSWCNYDDLNEYFWSSDCFSLGWPMRDDGEFFRSTFNLTQGRNGAQRTSGRTGKSNFVETRSFWNIFRSFDRLWTFYLLGLQVMFIIAWEGISVLDIFQKHVLYNLSSIFITAAILRLLQSILDLALNFPGYHRWRFTDVLRNILKVIVSLFWVIVLPLFYVHSFKGAPEFVKNLLSFLHQIKGIPAFYMLAVAVYLLPNILAAVLFLFPMLRRWIENSDWHIVRFFLWWSQPRIYVGRGMHESQFALLKYTLFWVILLAAKFSFSFFFQIKPLVQPTKDIMSIRHVDFGWHEVFPNAQHNYGAVIALWAPVLMVYFMDTQIWYSIFSTICGGVIGAFDRLGEIRTLTMLRSRFQSLPGAFNTYLVPTDKRHKKKFSLSKRFAEISASKRSEAAKFAQLWNEIICSFREEDIISDRKGLRAKLFSCFMDLLMVPYSSDPSLKIIQWPPFLLASKIPVAVDMAAQFRGKDSDLWKRICADEYMKCAVIECYESFKNVLHALVVGEAEKRTISVIIKEVENSISKNTLLANFRMGFLPSLCKKFVELVEILKGADSSKQGTVVVLLQDMLEVFTRDMMVNEISELAELNHSSKDSGRQLFAGTDAKPAVLFPPVVTAQWEEQIRHLYLLLTVKESAIEIPTNLEARRRIAFFTNSLFMDMPRAPRVRKMRSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIFPDEWNNFMERLDCKKDSEIWENDENILQLRHWASLRGQTLSRTVRGMMYYRRAIKLQAFLDMANEKEILGGYKAVTVPSEEDKKSHRSLYANLEAIADMKFTYVATCQNYGNQKRSGDRHATDILNLMVNNPSLRVAYIDEVEEREGGRVQKVYYSVLIKAVDNLDQEIFRIKLPGPAKLGEGKPENQNHAIVFTRGEALQTIDMNQDNYLEEALKMRNLLEEFSEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQCGKGRDVGLNQISLFEAKVACGNGEQILSRDIYRLGHRFDFFRMLSFYSTTIGFYISSMIVALTCYVFLYGKLYLSLSGSEAAIVKLAKRKGDEALEAALTSQSLVQIGLLMTLPMFMEIGLERGFRTAIGELIIMQLQLAPVFFTFSLGTKLHYFGRTLLHGGAKYRATGRGFVVRHEKFGENYRLYSRSHFVKGLELTMLLICYKIYGAATPDSTSYGFLSWSMWFLVCSWLFAPFLFNPSGFEWQKIVEDWDDWKKWISSRGGIGVPANKSWESWWDEEQEHLQHTGFLGRTCEAILALRFFIYQYGIVYHLRVARGDKSILVYALSWIVIVALMVIFKIVSMGRKQFSADFQLMFRLLKLFLFIGAIVALGLMFTLLNLTVGDIFASLLAFLPTAWALVQIAQACRPFVKGIGMWGSVKAVARGFEYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHK 1930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00166 1930 Gene3D - 25 187 IPR023175 -
Cca03g00166 1930 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 327 438 IPR026899 -
Cca03g00166 1930 Pfam Vta1 like 39 167 IPR039431 -
Cca03g00166 1930 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 935 948 IPR004838 GO:0003824|GO:0009058|GO:0030170
Cca03g00166 1930 Pfam 1,3-beta-glucan synthase component 1052 1746 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cca03g00166 1930 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 5 1929 - -
Cca03g00166 1930 SMART FKS1_dom1_2 325 441 IPR026899 -
Cca03g00166 1930 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 5 1929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00166 Cca-Chr3 2563012 2578994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00166 8 1930 Glycosyltransferase AT1G05570 59.663 0.0 2357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00166 K11000 - gmx:100777245 3569.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00166 03 2563012 2578994 Cca09g02260 09 47821380 47828419 PCT