Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g02098 ATGGCCAGTGGCGTGGTGACTACAGTGGACTGCGAGAAACAAGTTAGATCATGGAGGCTGCTACGTTCTCTCATGCATCTACTAATTCCCACGTGCAACTGCGCCACCATTATAGAAGAAGAACACCAAGCTGTAACACCATCAAACGTGTGTCTCCAAAACCCCACCAAATATCATTCACCATCACTGACAAATTCAACTACCATTACAGGCACCATATTCGGATACCGCAGAGGCAAGGTGAGTTTTTGCATTCAGGCAAACGCCAGCTCCACCAACCCAATTCTTCTGCTAGAGTTGGCAGTTCCTACAACCATCTTAGCCAAGGAAATGAGAGAAGGGTCTCTCAGAATTGCACTAGAGTGCgatgataatgataataataatgatgatgaaaaCGCAAACGCTCTTTTGTCAACGCCTTTGTGGACAATGTACTGCAATGGGAGGAAGGTGGGGTATGCCGTTAAGCGCAGGCCCTCGAAAACTGATTTTGAAGCATTAAGATTGATGCGTTCGGTTGTTGAGGGAACTGGGGTGATGAACTGCAAGGATTTCGTGCATAAAGAAGATGATCAACTTATGTACCTTAGAGCAAACTTTCAGAGAGTTCGTGGCTCAGCTAACTCTGAATCTTTCCATTTGATTGATCCAGAGGGAGACATTGATCAGGAGCTTAGTATTTTCTTTTTTCGGTCCAGGTGA 705 0.4397 MASGVVTTVDCEKQVRSWRLLRSLMHLLIPTCNCATIIEEEHQAVTPSNVCLQNPTKYHSPSLTNSTTITGTIFGYRRGKVSFCIQANASSTNPILLLELAVPTTILAKEMREGSLRIALECDDNDNNNDDENANALLSTPLWTMYCNGRKVGYAVKRRPSKTDFEALRLMRSVVEGTGVMNCKDFVHKEDDQLMYLRANFQRVRGSANSESFHLIDPEGDIDQELSIFFFRSR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g02098 234 PANTHER - 1 233 - -
Cca09g02098 234 PANTHER DUF617 FAMILY PROTEIN 1 233 - -
Cca09g02098 234 Pfam Protein of unknown function, DUF617 69 232 IPR006460 GO:0010274
Cca09g02098 234 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 69 233 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g02098 Cca-Chr9 45997878 45998582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g02098 - - gmx:100794628 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02098 09 45997878 45998582 Cca03g00104 03 1465446 1466672 PCT