Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01794 ATGTCTGCTGCTGTGTCTGCTACCAAGGATGTTCCCTTCAATTTGGAGGAAGAGCTCAAAAACAAAGGAACCAACAAGGTTGTTGGGGAAACAAACCAAGTTTCTTACAATGATGATGCTGAAGGGACTGAGTCAGAGGGAGAGGAAGACCCCAAGTTGGAATTGTTGGATCTTGGCCCTCAGTTTTCCCTAAAGGAACAGCTTGAGAAAGATAAGGATGATGAAAGTTTGAGAAAATGGAAGGAACAACTTCTGGGAGGTATTGATGTGTCTGCTGTTGGAGAGAACAAAGAGCCAGAAGTGAAGATAGTGAGCCTCACCATAATATGCCAAGGGAGGCCTGATCTCATTCTACCAATTCCATTTACTTCGGATGCTAAGAAGAGTATCTTCACCCTTAAGGAAGGAAGTCAATACCGCTTGAAATTCTCCTTCACTGTCTCCAACAACATTGTTTCTGGCCTCAAATACACCAATGTTGTTTGGAAAACTGGGGTAAGAGTGGACAACACAAAGATAATGTTGGGAACTTTTAGCCCAAGGCAGGAACCATATACATATGAATTGGAAGAAGAAACTACCCCTTCAGGGTTGTTTGCTAGGGGAACGTATTCAGCTAGAACCAAGTTTGTAGATGATGATCGCAAATGCTACTTGGATACTAGTTACCACTTTGATATTCAGAAGAGTTGGCCTACACCCATCTAA 708 0.4266 MSAAVSATKDVPFNLEEELKNKGTNKVVGETNQVSYNDDAEGTESEGEEDPKLELLDLGPQFSLKEQLEKDKDDESLRKWKEQLLGGIDVSAVGENKEPEVKIVSLTIICQGRPDLILPIPFTSDAKKSIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDNTKIMLGTFSPRQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTSYHFDIQKSWPTPI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01794 235 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 7 234 - -
Cca09g01794 235 Gene3D Coagulation Factor XIII, subunit A, domain 1 56 233 IPR024792 -
Cca09g01794 235 PRINTS RHO protein GDP dissociation inhibitor signature 91 106 IPR000406 GO:0005094|GO:0005737
Cca09g01794 235 PRINTS RHO protein GDP dissociation inhibitor signature 151 167 IPR000406 GO:0005094|GO:0005737
Cca09g01794 235 PRINTS RHO protein GDP dissociation inhibitor signature 168 183 IPR000406 GO:0005094|GO:0005737
Cca09g01794 235 PRINTS RHO protein GDP dissociation inhibitor signature 210 227 IPR000406 GO:0005094|GO:0005737
Cca09g01794 235 MobiDBLite consensus disorder prediction 1 53 - -
Cca09g01794 235 MobiDBLite consensus disorder prediction 25 40 - -
Cca09g01794 235 SUPERFAMILY E set domains 41 232 IPR014756 -
Cca09g01794 235 Pfam RHO protein GDP dissociation inhibitor 44 229 IPR000406 GO:0005094|GO:0005737
Cca09g01794 235 PANTHER RHO GDP-DISSOCIATION INHIBITOR 7 234 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01794 Cca-Chr9 42628632 42630630 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01794 K12462 - gmx:100806852 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00070 01 725224 727319 Cca09g01794 09 42628632 42630630 PCT