Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00070 ATGTCTGCAGCAGTGTCCTCCACAACTCCTCATTTAGAGGAAGAGCTCAAAAACAAAGTAACAGACAACAACAACGTTGGTGGAGAGCCAGACCAAGAGCAGGTTCCTTACAGTGATGGTGCCAACTCTGATGTTGCTGAAGAAACTGAGCCTGAGGAAGATGATGAATCCAAGTTGGAATCTGACAGAGAACTTGATCTTGGCCCTCAGGTCACCCTCAAGGAACAGCTTGAGAAAGATAAGGATGATGAGAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAAAAGTTGATATGTCTGTGGTTGGACTTGGAGAAAGTAAAGACCCTGAAGTGAAGATATTGAGCCTCACTATTACAAGCCCAGACAGGCCTGACCTCATCCTCCCAATTCCATTCACTAATGATCCTAAGAAAAGTCTCTTCATCCTTAAGGAAGGAAGCAAATGCCGCACGAAATTCACTTTCACTGTCTCCAGCAACATCGTTTCTGGTCTCAAATATACAAATCTTGTTTGGAAAACCGGCGTTAGAGTGGGCAGCAGAAAGAAGATGTTTGGAACTTTTAGTCCTCAGCAGGCACCATATACGTATGAATTGGAAGAAGAAACTATCCCTTGTGGCATGTTTGCAAGGGGAACCTATGCTGCAAGAACCAAGTTTGTAGATGACGATCGAAAATGCTACTTAGATGTCAATTACTACTTCGAAATTCAGAAGAATTGGGCAACACCTCAATGA 741 0.4345 MSAAVSSTTPHLEEELKNKVTDNNNVGGEPDQEQVPYSDGANSDVAEETEPEEDDESKLESDRELDLGPQVTLKEQLEKDKDDESLRKWKEQLLGKVDMSVVGLGESKDPEVKILSLTITSPDRPDLILPIPFTNDPKKSLFILKEGSKCRTKFTFTVSSNIVSGLKYTNLVWKTGVRVGSRKKMFGTFSPQQAPYTYELEEETIPCGMFARGTYAARTKFVDDDRKCYLDVNYYFEIQKNWATPQ 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00070 246 MobiDBLite consensus disorder prediction 21 39 - -
Cca01g00070 246 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 7 244 - -
Cca01g00070 246 Pfam RHO protein GDP dissociation inhibitor 52 241 IPR000406 GO:0005094|GO:0005737
Cca01g00070 246 SUPERFAMILY E set domains 46 242 IPR014756 -
Cca01g00070 246 MobiDBLite consensus disorder prediction 1 70 - -
Cca01g00070 246 MobiDBLite consensus disorder prediction 45 60 - -
Cca01g00070 246 PANTHER RHO GDP-DISSOCIATION INHIBITOR 7 244 IPR000406 GO:0005094|GO:0005737
Cca01g00070 246 Gene3D Coagulation Factor XIII, subunit A, domain 1 62 244 IPR024792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00070 Cca-Chr1 725224 727319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00070 K12462 - gmx:100797593 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00070 01 725224 727319 Cca09g01794 09 42628632 42630630 PCT