Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01789 ATGTCTGATTGGGGCCCAGTGTTTGTGTCGTTGGTGCTGTTTGTGCTCCTAACACCGGGGTTGCTGTTTCAGTTACCTGGGAGGTCAAGGTGCGTTGAGTTTGGCAACTTTCAAACAAGTGCTGCTGCTGTACTCATCCACTCCCTCCTCTACTTTGCCTTCATATGTGTCTTATTGCTAGCTATTAAGGTGATGGCTGCTGATTGGGGTCCAGTGGTGATATCAGTGGTGCTGTTTGTGCTACTAAGTCCAGGGCTGCTTTTTCAGCTTCCAGCTAAGGGCAGGGTGGTGGCCTTTGGAAGTATGCAAACTAGTGGACTATCTATCTTAGTCCACACTATCATCTTCTTTGGACTCATCACCATATTTCTTCTTGCAATTGGTGTGCATATTTACTCTGGATAA 405 0.4667 MSDWGPVFVSLVLFVLLTPGLLFQLPGRSRCVEFGNFQTSAAAVLIHSLLYFAFICVLLLAIKVMAADWGPVVISVVLFVLLSPGLLFQLPAKGRVVAFGSMQTSGLSILVHTIIFFGLITIFLLAIGVHIYSG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01789 134 PANTHER PROTEIN, PUTATIVE-RELATED 2 64 - -
Cca09g01789 134 PANTHER OS05G0103400 PROTEIN 2 64 IPR021775 -
Cca09g01789 134 PANTHER OS05G0103400 PROTEIN 65 134 IPR021775 -
Cca09g01789 134 PANTHER PROTEIN, PUTATIVE-RELATED 65 134 - -
Cca09g01789 134 Pfam Protein of unknown function (DUF3339) 67 132 IPR021775 -
Cca09g01789 134 Pfam Protein of unknown function (DUF3339) 1 64 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01789 Cca-Chr9 42522874 42527809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01789 - - ccaj:109810730 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00074 01 755444 756393 Cca09g01789 09 42522874 42527809 PCT