Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00074 ATGGCGGATTGGGGTCCAGTAGTGATAGCGGTGGTGCTGTTTGTGTTGCTGAGCCCTGGTTTGTTGATTCAATTGCCAGGGAGGAACAGAGTGATGGAGTTTGGGAACATGCAAACCAGTGCAGTGTCTATTGTGGTCCATACAATCATCTTCTTTGGTCTCATTACCATCTTTCTTGTTGTTATTGGTGTGCATATCTACGCTGGCTAA 210 0.4619 MADWGPVVIAVVLFVLLSPGLLIQLPGRNRVMEFGNMQTSAVSIVVHTIIFFGLITIFLVVIGVHIYAG 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00074 69 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
Cca01g00074 69 PANTHER OS05G0103400 PROTEIN 1 69 IPR021775 -
Cca01g00074 69 PANTHER OS05G0103400 PROTEIN 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00074 Cca-Chr1 755444 756393 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00074 - - gmx:100527578 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00074 01 755444 756393 Cca09g01789 09 42522874 42527809 PCT