Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01779 ATGATGAGAGGGgtgtttgcgtttgtgtttgtgtgtgtggctgtgttggtgACAGTGGGGGAATCGGAAGGAGCAGAGAATTTGGCAGCGAAATGCAACCTTCTGGTCCAGAAAGTGATTCCGTGCATGAACTATGCGACGGGGCAGGCGGCGGTTCCGACGAAGGGTTGCTGCGAGGCGACGTCGGAGATAAAGACGAGCAATCCGGAGTGCTTGTGCTTCGCTATCCAACAGACTCATAAGGGCAGCCCTGAGGTGAAAAGCATGGGCATTCAAGAGGCCAGGCTCCTTCAGCTCCCCACTGCTTGCAACCTCAAGAATGCCAGCACCACCAACTGTCCAAAGCTTCTGGGTCTATCTCCAAACTCTCCGGATGCTGCCATCTTCAGGAATGCTTCGTCGAGAAGCAATTCGTCTTCCACGGTGGGAACCACAACCACAACTGCGACCACAACAGCGGTGTCTGAGAACCAGAAAGCCTCTAAAGGAAACATGCTTAGACCTGCACTCATGTCAGACCTAATAGCAGTGGTCATGCTTTCTATTGCTTCTGCTGTCAACATTTACTCTTCATATTAA 579 0.4836 MMRGVFAFVFVCVAVLVTVGESEGAENLAAKCNLLVQKVIPCMNYATGQAAVPTKGCCEATSEIKTSNPECLCFAIQQTHKGSPEVKSMGIQEARLLQLPTACNLKNASTTNCPKLLGLSPNSPDAAIFRNASSRSNSSSTVGTTTTTATTTAVSENQKASKGNMLRPALMSDLIAVVMLSIASAVNIYSSY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01779 192 SMART aai_6 32 113 IPR016140 -
Cca09g01779 192 Gene3D - 28 111 IPR036312 -
Cca09g01779 192 CDD AAI_LTSS 41 105 - -
Cca09g01779 192 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 8 181 - -
Cca09g01779 192 Pfam Probable lipid transfer 17 113 IPR016140 -
Cca09g01779 192 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 8 181 IPR043325 -
Cca09g01779 192 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 113 IPR036312 -
Cca09g01779 192 MobiDBLite consensus disorder prediction 131 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01779 Cca-Chr9 42403616 42406282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g01779 31 177 Acyl Lipid Metabolism Gene Families AT1G27950 46.259 3.13e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01779 - - gmx:100799403 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00079 01 818261 820806 Cca09g01779 09 42403616 42406282 PCT