Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01773 ATGGCCACCTGCGTGGAGAGGGACGTGGATAAGAAGAGCCATGAAGAACTGAAGCACCTTGGCTTTGTGAAGATTGCAGCAATTAAAGCCTTTGTGTGTGTCTCCAATCTCTACGACTTTGCAAAGCAAAACTCGGGACCTTTGAGATCTGCTGTTGGAACCGTCGAAGACACTGTAACCACAGTTCTGGGTCCTGTCTACCACAAATTCAAGCCTGTCCCTAACCATCTTCTCCTTTTTGTCGACAACAAGGTGGATGAAGCTAGGTACAAATTCGAAGAGCATGCTCCTCCTTTGGTTAAGCAGGTTGCAAGCCAAGTTAATTGTTTGGTTCAGGAAGTGACACAGAAAGCAGAGAAAGTAGTGAGTGAGGCACAGTGTGGAGGGGCAGGTGCCGCAGCACATTATGTTGCGACGGAGTTGGCAGAGATGGCAGGAGAGTGGTCAGACAAGTACAACCATGTGGTGAAGAACAAGAGTGAGTCAAAGGGATGTGGTGTGTTTGGTTATTTGCCTTTGATTCCAATTGATGAAATAGCCGAGGCGTTTAAACAGGGAGAAGCCAAAGCCAATGTGAATGAAGATGAATTTAGGGGCAATGTGGGTGGGAATGGAAGTGTAAGAAATGGGTGCAGACTGTTGAGAGCATTTAAGTTGGTAGAACATTATGTGAATGGTGGTTGTGTTAAATGGTCACAACGTTGTTTCGTCCTTTTCTTGCATGAAAGTTATCTTGGTTGTCGTGTTGGGAGAATGGGGGTGCTCAGTGCTCACTAA 777 0.462 MATCVERDVDKKSHEELKHLGFVKIAAIKAFVCVSNLYDFAKQNSGPLRSAVGTVEDTVTTVLGPVYHKFKPVPNHLLLFVDNKVDEARYKFEEHAPPLVKQVASQVNCLVQEVTQKAEKVVSEAQCGGAGAAAHYVATELAEMAGEWSDKYNHVVKNKSESKGCGVFGYLPLIPIDEIAEAFKQGEAKANVNEDEFRGNVGGNGSVRNGCRLLRAFKLVEHYVNGGCVKWSQRCFVLFLHESYLGCRVGRMGVLSAH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01773 258 Pfam Rubber elongation factor protein (REF) 12 143 IPR008802 -
Cca09g01773 258 Pfam Rubber elongation factor protein (REF) 135 185 IPR008802 -
Cca09g01773 258 PANTHER RUBBER ELONGATION FACTOR PROTEIN 11 143 - -
Cca09g01773 258 PANTHER RUBBER ELONGATION FACTOR PROTEIN 144 196 - -
Cca09g01773 258 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 11 143 IPR008802 -
Cca09g01773 258 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 144 196 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01773 Cca-Chr9 42311186 42312666 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01773 - - gmx:100499806 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00085 01 886941 889956 Cca09g01773 09 42311186 42312666 PCT