LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca09g01753	ATGCCACCTTCCCCAGCATTTAGATGCTCTCCTGGTAGGGAGCCAAGACCAGACAGTCACAAGCGTGGACGTAGTCTTGAAAGCGGATTGCTCTTAAGAGAGAAAGATGATGATCTTGCATTGTTCAGTGAAATGCAGTCCAGAGAGAAAGAGAGTTTTTTGCTTCAGCCGTCGGATGAATTGGAAGACTCATTTTCGTCAAAGTTGAGGCATTTTTCTGATATCAAGCTTGGGATATCCATTCCCAGTCGAGGAGAATCCAGTGAATTGCTTAATGCAGATGGTGACAAGAATGACTATGATTGGTTATTGACACCACCGGACACACCACTGTTTCCTTCATTAGATGATGAACCACCAGAAATAAATGTTGTAAGCAGAGGAAGGCCTCGGAGTAAACCTATTTCCATATCAAGATCATCCACGATGGAGAGAAGTTACAAAAGCAGTAGGGGTAGTGCAAGTCCAAATCGTTTAAGTTCATCCCCTCGTTCTGGGAATAATACATTGCAATCGAGGGGAAGGTCTTCATCAACACCAAATTCTAGTCCCACACAAGTTATACGACAAGCTACTCCATCAAGAAGACCATCTCCACCTCCAACTAAGCCCATATCACCTGCTCCTAGGTCTTCCACTCCTACTCCTCGGCGGATCAGCACTGGCTCCAGTAGTCCTGCAGTTTCATCAGGGATTAGGGGAACTTCCCCTGTTAAAACAAGCCGTGGAAACTCTGCTTCACCGAAGATAAGAGCATGGCAAACTAATATTCCTGGTTTATCTTCTGATGCTCCTCCCAATCTTCGCACCTCTTTGGCTGATCGACCGGCATCATATGTGAGGGGTTCATCTCCAGCATCCAGAAATAGTAGGGATTCTACTTCTAAATTTGGTAGGCAATCAATGTCTCCCACTCCTTCCAGGAGCAGCAGTTATATTCAGAGTCATGATCGAGACCAATTTAGTTCACGCAGCAAAGGTTCTGTCATATCTTCTGGTGATGATGATCTAGACTCACTTCAGTCCATCCCAGTGGGTAGTCTAGACCGATTGGGTGCAAGAAGGGGTGGATCATTTTCTAACAGCAAATCTCCTTCAATTTCCAAGAAATCAGCCAAGATGCTGTCCCCAAGTTCTGCTCCAAAAAGATCTTTTGATTCTGCTATCCGGCAAATGGATAGGAAAAGTCCTCAGAACATGTTCAGGCCTCTTTTATCAAGTGTGCCAAGTACAACCTTTTATGCCGGAAAAGCAAATTCTGCACAACGTTCCCTGGTATCTAGAAACTCCTCTGTCACAACAAGCAGCAATGCAAGCTCTGATCATGGTACAAGTTTTGCACCAGATACTGAAGGGAGTGACCACAATCAAGATGATGCGGCTAGTGAAAGTGAGAAGATATTGTACACTGATATTCATGAAGAAATATTTTCCTTTGATAAAGTTGATGTATTAAATGCAAGCACTGGGCACGAGATCAATGATGAATCAGTTGATGTCCTGCACAATAAAACTGGAGGCCCTATGATTGCTTTAGGTCCCACTGAATCTGAAGCTTCTATTTATCATGGTATTGACGAAGAATTCAATGAAAGTTTAGAAACTTCCCATGTCATAGGTGACATTTCTGAAACTAGTGGTTTTGAGAATACAGCAATCTGTTCTAATTGTGGTTGCCCTCTTGAGGCCACAGATCAAACTGAAAGGAATCTTAGACTATGTTCAGAATGCAGGAGGAAAACCACATTGTTGAGACATACCATTCCAAAGGCAACTTTGGCAGTTTCCAATGACATTTTAGCGATTTCCACAAACGTTCCTTCTGGAGAAAAACCATCTGATGTAACAGACCAACTAACAGTTGTGTCTCAACTGCCTCAAGAGGCTGATGTGGGTAACATGAGGTACCCCTTTGGTGAACCAGATGCTGAGGAAACTCAGGAAAGTCAAACTTTTCCCGGTGAATTTATTGAGGACCACTCACAACAAAATCCTCTCTCAAGTTCACCAGTGGATAGAAGTGTGCAAATACCTACCAATCAGCTAGAGGTGGACCAGTCTGGGGCTGATTACAAGCCTGATAATCAATCTGGGGATCAGCAGTCGTATCTTTCCAAAGATCGCTCAAATTTGAAAGTGGACCTCTTGGAAGGCACTGGCATTTCTGTACTACTGAAAAGGTCAAGCAGTAGCAAAGGACCTGTAATTCAGGGCAGGACTTTTACTGCCTCAACACTATCTTATGATGATCTGTCTTTCGCAAGAAACAGCATTAACAGTATCAGAAGTTCAACTGGGCGTAGCAGTTATTCCACCTCATCATCCGTTGATTTCAGCTCAGCAAGACATTCCGATTTTCGTGTCCAAAGGCAGTCGAGTGGCAGGAAATTGGATGTAGACTATGGATATGATGTAAGGATCAAACCTCCAAGCCCTGGTTCATCTTTTTCTGGAATGTCAAACCATTCTTACCATGGATTAAGTTTTGCTACACAAGAAACTTCTTCTGGCAATACAGAATGTGGCAACTTGGAGGATATACCCCAAGATCTCCGAGACATGCAAGCTTCAGAAAATGCAGTTGCAGATGTGGTTGATTCTTCTTCTATGGGTTCGATTGTTGTCAAGGAAGTTAAACTCGAATATTCTGATCATGGTAGAACAACTGATGCTTGTAGCTCAGAATTAGTAAGCCAGGTTACTGGTGTTCAGCCTGACAACATTTCAGTGGCATCATTTCCAAATCATGGGAGTAGTATTTCAAATGATAGTATCGAAGACCATCCAAATAATGTAAGCTGTGTCTCAAATACAGAAACATCAGTTAAGGATCCAGAGTCATCCTTTGATGAGAAACATGATATGGAGAACTCTAATGTTGATGGACTGAATGCTTTGATAACTACCAACACTTCTACAATTCAAGAATCAGAAATAGAAGGGGAACACAGTTGTCAAAATGATACTCGTGTGGTGGATGATGATCCGTCGCTGGTATCAAAGAGCCCCATCAATGAATTTCAGGAACATTCTATTCCAAATTCTTCCAGTGATTGTCTTGCATCTTCTGTTTCAGAGCTCAATGCCTCCGAGTTCTCCCATGGCATAGAGGGATCCACAGTTACAGTGGAGTGTCAAGATGGAGGGAACACTAGAAGCCTAACACTTGATGAGGCAACAGATACTATACTATTTTGCAGCTCTATCATCCATGATCTTGCATATCAGGCTGCAACGCTAGCAATGGAAAAGGAACCCTCAGAACCATTGGAAGGTTCTGAGCCGACAGTGACTATATTGGCGAAACCCAATTCCGATAGAAAGGATTCTCGGAGCCGAACTTCTGGCAAGCATGGTATGAAACCCCAAAAGGCCAGGCCAAAGGTGGTGGAAACTGATGTAAAATCAAAATCCCCTTCCAAGACTGAGAATGATGAAAACGTTGATGAGTCTTTGACACGCAATGTTGGCCTTCCTAACAAGGTAGACAGCATGAAGCCCCCTAATAAGCTTGAATCAAAGTGTAATTGCATAATAATGTGA	3543	0.4299	MPPSPAFRCSPGREPRPDSHKRGRSLESGLLLREKDDDLALFSEMQSREKESFLLQPSDELEDSFSSKLRHFSDIKLGISIPSRGESSELLNADGDKNDYDWLLTPPDTPLFPSLDDEPPEINVVSRGRPRSKPISISRSSTMERSYKSSRGSASPNRLSSSPRSGNNTLQSRGRSSSTPNSSPTQVIRQATPSRRPSPPPTKPISPAPRSSTPTPRRISTGSSSPAVSSGIRGTSPVKTSRGNSASPKIRAWQTNIPGLSSDAPPNLRTSLADRPASYVRGSSPASRNSRDSTSKFGRQSMSPTPSRSSSYIQSHDRDQFSSRSKGSVISSGDDDLDSLQSIPVGSLDRLGARRGGSFSNSKSPSISKKSAKMLSPSSAPKRSFDSAIRQMDRKSPQNMFRPLLSSVPSTTFYAGKANSAQRSLVSRNSSVTTSSNASSDHGTSFAPDTEGSDHNQDDAASESEKILYTDIHEEIFSFDKVDVLNASTGHEINDESVDVLHNKTGGPMIALGPTESEASIYHGIDEEFNESLETSHVIGDISETSGFENTAICSNCGCPLEATDQTERNLRLCSECRRKTTLLRHTIPKATLAVSNDILAISTNVPSGEKPSDVTDQLTVVSQLPQEADVGNMRYPFGEPDAEETQESQTFPGEFIEDHSQQNPLSSSPVDRSVQIPTNQLEVDQSGADYKPDNQSGDQQSYLSKDRSNLKVDLLEGTGISVLLKRSSSSKGPVIQGRTFTASTLSYDDLSFARNSINSIRSSTGRSSYSTSSSVDFSSARHSDFRVQRQSSGRKLDVDYGYDVRIKPPSPGSSFSGMSNHSYHGLSFATQETSSGNTECGNLEDIPQDLRDMQASENAVADVVDSSSMGSIVVKEVKLEYSDHGRTTDACSSELVSQVTGVQPDNISVASFPNHGSSISNDSIEDHPNNVSCVSNTETSVKDPESSFDEKHDMENSNVDGLNALITTNTSTIQESEIEGEHSCQNDTRVVDDDPSLVSKSPINEFQEHSIPNSSSDCLASSVSELNASEFSHGIEGSTVTVECQDGGNTRSLTLDEATDTILFCSSIIHDLAYQAATLAMEKEPSEPLEGSEPTVTILAKPNSDRKDSRSRTSGKHGMKPQKARPKVVETDVKSKSPSKTENDENVDESLTRNVGLPNKVDSMKPPNKLESKCNCIIM	1180

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	357	385	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	630	650	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	1085	1170	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	935	957	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	424	451	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	282	338	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	683	706	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	762	787	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	1124	1150	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	212	268	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	83	385	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	424	462	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	133	193	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	762	791	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	13	29	-	-
	Cca09g01753	1180	PANTHER	RUN/FYVE DOMAIN PROTEIN	1	1180	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	194	211	-	-
	Cca09g01753	1180	PANTHER	GASTRIC MUCIN-LIKE PROTEIN	1	1180	-	-
	Cca09g01753	1180	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca09g01753	Cca-Chr9	42053300	42058925	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca09g01753	-		-	gmx:100810674	1731.46

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca01g00107	01	1060338	1066850	Cca09g01753	09	42053300	42058925	PCT