Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00107 ATGCCGCCTTCCCCGGCATTGAGATACTCTCCCGGGAGAGAGCCGAGAGCTGATGGTCACAAGCGGGGGCGCAGTCTTGAAAGTGGATTGCTTTTCCGGGAGAAGGATGATGATCTTGCTTTGTTCAATGAAATGCAAACCAGAGAGAAGGATAGTTTTTTGCTTCAGGCGTCTGATGACTTGGAAGAATCGTTCTCTACAAAGTTGAGACATATTTCTGATGTCAAGCTTGGAATCTCCATTCCTGGTCGAGGAGAAACCAGTGACTTGCTTAATGATGGTGAAAAGAATGATTACGACTGGTTATTGACACCCCCAGACACACCACTGTTTCCTTCGTTAGATGATGAGCCATCAATGACTAGTTTTGCAAGCAGAGGAAGGCCTCAGAGTAAACCCATTTCCATATCAAGATCCTCTACGATGGATAAAAGTTACCGAAGCAGTAGGGGTAGTGCAAGTCCAAATCGTTTAAGTCCATCCCCTCGATCAGGAACTAATACATTGCAATCAAGGGGAAGGCCTTCGTCGGTGCCAAATTCCAGTCCAACCCCAAGTGTACGGTATGCCACTCCATCTAGAAGACCATCTCCACCTCCAAGTAAGCCCATGACACCTGCTTCCAAGTATTCCACTTATACTCCCCGAAGGATGAGCACTGGCTCCAGTGGTTCTGTTGTCTCATCAGGAGTTAGGGGAACTTCCCCAGTTAAAGGAGTTAGGGGAACTTCCCCAGTGAAGACAAATCGTGGAAATTCTACGTCACCAAAGATAAGGGCATGGCAAACTAATATTCCTGGCTTTTCTTCTGAAGCTCCTCCCAATCTTCGTACTTCATTGGCTGATCGACCAGCATCATATGTGAGGGGTTCATCTCCTGCATCCAGAAATGGTAGGGACTCTACATCCAAAGTCAGTAGGCAATCAATGTCTCCAACTGCTTCTAGGAGTAGTAGCTCTTTTCATAGTCATGATCGAGACCAATTGAGCTCACGCAGCAAAGGTTCTATTGCATCATCCGGTGATGATGATCTAGACTCTCTGCAATCCATGACAGCGGGTAGCTTAGACAGATTGAGCTCAAGAAGGGGTGGTTCATTTTCAACCAACAAAACTCCTGCTATTTCCAAGAAATCAGCCAGGATTGTGTCCCCAAGTTCTGCTCCTAAAAGATCATTTGATTCAGCTATCCGGCAAATGGATAGAAAAACTCCTCAGAACATGTTCAGGCCACTTTTATCCAGTGTTCCGAGTACAACTTTTTATGCTGGAAAAGCAAATTCTGCACATCGTTCCCTTGTATCTAGGAATTCATCTGTTACAACAAGCAGCAATGCAAGCTCTGATCAAGGAACAACCTTTGCACTGGATACTGAAGGGAGTGAGCATAATCAAGATGATATGGCAAGTGAAGCTGATAGGATATTATATCCTGATATACATGAAGAAGTGTTTGCATTTGATAAGATTGATGCATTAAATGCAAAAATTGAGCAAGAGATTAATAGGGAATCAGTGGATATCCTGCATAATCAAACCAGAGACCCCAAGCCTGTATTTAGTCTAATTGAATCTGAGGGTTCTATTTCCCACATTCATATTGACACTAGAGTCAATGAAAGTTCAGAAATTACACATGTCAGAGGTGACATTTCTGAAACTGGCAATTTTGAAAATACAGCACTCTGTTCTCATTGTGGTTGTTCTTTTGAGGTCACTAGTCAAGCTGAGAAGAATATTGGGCTTTGTCCAGAATGCAGCAGGAAAACCACATTGTTGAGGGTCACCATCCCTGAGACAACTTTGGCAGCATCTGAAGACCCTTCATTGATTACAACAGACATCCCTAAAGAAGAAAAATCACTATCTAAAACAAACCAACTAATGGTTGCCATTGCATCTGAACTGCCTGAAGAGACAAATGTGGGTGACTTGAGGTTTCCTGGTGAACAGGATGCTGAGGAAAGTCAAACTTCATGTAGTGAACTAAACCAGGATCACTCACAAAACAGTTCTCTTCCAAATTCATTGGCGGAGGTAGGTAGGCAGACATCTGACAACCGGCTAGAGATGAACCAATCTGGAGTTGATTACATGAATCCTGATAGTGAATATGGGGATCAGCATCACTGCAGTGATCGCCCTAATTTGAACATGGACCCCCTGGATGGCACTGGCATTTCTGTATTGCTGAAAAGGTCTAGCAGCAATAAAGGACCTGTATTTCAGGGCAGGACTTTTACTGCCACAACCATATCTTACGATGATCTTTCTCTTGCAAGAGACAGTATTAACAGTTTTAGAAGCTTAATGAGACCTGGTAGTTATTCCGCTTCATCATCAATTGATCTCAGCTCAACTAGGCAAACAGAGTTTCGTGTGCAAAGGCAGCTGAGTGGCAGGAAGTTGGATGTGGACTCTGGATATGACTTGAGGATCAAGCCTCCAAGCACTGCTTCATCTTTCTCTGGAGCTTCAAACCATTCTCGCCATGATTTAGGTCTTATAACTCGAGAGACTGTTGGCAGTACAGAAGGTGGCTTTGTAGAAGAGGTGCCCCGAGTTTTGCAAGAAATCCAAGCTTTGGGAAATACAGTGACAGACATAATCGATGCTTCTTCCATCAATTTAGTTGTTGAGGAAGATAAATTTGAATATGATGATAGTAGTAGAGTAAATAATGCTTGCAGCTCAGAATTTTTGAGTCAGGCTGCTGCTGTTCAGTCTGATGACAATTTAGTCACATCATTTCCAAATCATGGGGATTGTATTTCACATGAAATTGTTGATGATCATCCAAATAATGCTGGGGATGTCTCAGACACAGAAACATCAGCTAAGGATCCAGAGTTATCTAGTCATGAGAAACATGATGTGCAGTGTTTAAATGTTAATAACGAACTGGATGCTTTGGTTACAACCAACTGTTCCACAATTACAGAATCAGAAATAGAAGGGGAAAACTATTGTGAGAATAAAAGCATCCTTGATGACTTTCGGGAACCTTCTGCCCAAAATCCTTCCAACGATTGTCACGCTGCTTCTGTTTCAGAGTTCAATGTCTCTGAGTCCCATGGCATTGAGGAATCAACAGTTACAGTGGAGTGTCAAGGTGCACGCAGCACTAGAAGCCTGACATTTGAAGAGGCAACAGATACAATCCTTTTTTGCAGTTCCATCGTCCATGATCTTGCTTATAAGGCTGCAACAATAGCGATGGAAAAGGAATGTTCTGACCCATTTGAACGTTCTGAACCAACAGTGACCTTATTGGGGAAAGCCAATTCTGACAGAAAGGATAGTCGTGGCCGACCTCTCAGCAGGCGCACTTTGAAATCCCAGAAGGCCAAGACCAAACAGAGGAGGGTGGAAACTGATGTCAAAACCCCTTCTGGCAAGACTGAGAATGATGAAAATATTGATGAGTCTTTCACACAAAATGTTGGGCTTCCTAACAAGGTAGATAGTATGAGGCCCCAAAAGCTTGAATCAAAGTGCAATTGCATCATAATGTGA 3516 0.4317 MPPSPALRYSPGREPRADGHKRGRSLESGLLFREKDDDLALFNEMQTREKDSFLLQASDDLEESFSTKLRHISDVKLGISIPGRGETSDLLNDGEKNDYDWLLTPPDTPLFPSLDDEPSMTSFASRGRPQSKPISISRSSTMDKSYRSSRGSASPNRLSPSPRSGTNTLQSRGRPSSVPNSSPTPSVRYATPSRRPSPPPSKPMTPASKYSTYTPRRMSTGSSGSVVSSGVRGTSPVKGVRGTSPVKTNRGNSTSPKIRAWQTNIPGFSSEAPPNLRTSLADRPASYVRGSSPASRNGRDSTSKVSRQSMSPTASRSSSSFHSHDRDQLSSRSKGSIASSGDDDLDSLQSMTAGSLDRLSSRRGGSFSTNKTPAISKKSARIVSPSSAPKRSFDSAIRQMDRKTPQNMFRPLLSSVPSTTFYAGKANSAHRSLVSRNSSVTTSSNASSDQGTTFALDTEGSEHNQDDMASEADRILYPDIHEEVFAFDKIDALNAKIEQEINRESVDILHNQTRDPKPVFSLIESEGSISHIHIDTRVNESSEITHVRGDISETGNFENTALCSHCGCSFEVTSQAEKNIGLCPECSRKTTLLRVTIPETTLAASEDPSLITTDIPKEEKSLSKTNQLMVAIASELPEETNVGDLRFPGEQDAEESQTSCSELNQDHSQNSSLPNSLAEVGRQTSDNRLEMNQSGVDYMNPDSEYGDQHHCSDRPNLNMDPLDGTGISVLLKRSSSNKGPVFQGRTFTATTISYDDLSLARDSINSFRSLMRPGSYSASSSIDLSSTRQTEFRVQRQLSGRKLDVDSGYDLRIKPPSTASSFSGASNHSRHDLGLITRETVGSTEGGFVEEVPRVLQEIQALGNTVTDIIDASSINLVVEEDKFEYDDSSRVNNACSSEFLSQAAAVQSDDNLVTSFPNHGDCISHEIVDDHPNNAGDVSDTETSAKDPELSSHEKHDVQCLNVNNELDALVTTNCSTITESEIEGENYCENKSILDDFREPSAQNPSNDCHAASVSEFNVSESHGIEESTVTVECQGARSTRSLTFEEATDTILFCSSIVHDLAYKAATIAMEKECSDPFERSEPTVTLLGKANSDRKDSRGRPLSRRTLKSQKAKTKQRRVETDVKTPSGKTENDENIDESFTQNVGLPNKVDSMRPQKLESKCNCIIM 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00107 1171 MobiDBLite consensus disorder prediction 1117 1140 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 432 459 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 79 397 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 290 319 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 206 232 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 13 28 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 930 956 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 652 680 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 1 28 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 432 467 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 241 276 - -
Cca01g00107 1171 PANTHER RUN/FYVE DOMAIN PROTEIN 1 1171 - -
Cca01g00107 1171 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 1171 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 332 393 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 118 191 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 639 680 - -
Cca01g00107 1171 MobiDBLite consensus disorder prediction 1078 1152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00107 Cca-Chr1 1060338 1066850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g00107 - - gmx:100794773 1816.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00107 01 1060338 1066850 Cca09g01753 09 42053300 42058925 PCT