Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01431 ATGGAGGACGTTGAGCGAGTGAAGGCGGAGGCAGTGCAGATAATGGGAGTGTTTCAAGTGCTCCCAAGGCTCGTGGTTTTCGATCTCGATCACACTCTCTGGCCTTTCTACTGTGAGTGGCGGTCGAAGCAGGACACGCCTTCTTTGTTTCCCCAAACGAGAGGGATATTGCATGCACTCAAACACAAGAGGCTTGATATTGCCATTGCTTCCAAGTCCCCCACTCCTGACATCGCAACCACCTACCTCGACAAACTCGCCATCAGGTCCATGTTTGTCGCCGAGGAAATATTTTACAGCTGGACACACAAAACTGATCATTTTCAGAGAATTCAATCAAAGACTGGGGTCCCCTATAAGTCTATGCTCTTCTTTGATGATGATGATAACAATATCCAAGAGATCTCAAAAATTGGAGTGACAAGCATTTTGGTTGGAAATGGGGTAAATCTTAGAGCATTCAGAGACGGCCTCACAAAATTTTCTCAAAACACGAAAGCATCAAAGAACAAGCAGACAAAGCCCAAGTAG 531 0.4595 MEDVERVKAEAVQIMGVFQVLPRLVVFDLDHTLWPFYCEWRSKQDTPSLFPQTRGILHALKHKRLDIAIASKSPTPDIATTYLDKLAIRSMFVAEEIFYSWTHKTDHFQRIQSKTGVPYKSMLFFDDDDNNIQEISKIGVTSILVGNGVNLRAFRDGLTKFSQNTKASKNKQTKPK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01431 176 SFLD C1.5.2: MDP Like 5 170 - -
Cca09g01431 176 TIGRFAM HAD-SF-IIIC: HAD phosphatase, family IIIC 24 138 IPR010033 -
Cca09g01431 176 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE-LIKE PROTEIN 1 175 - -
Cca09g01431 176 Pfam Acid Phosphatase 48 163 IPR010036 GO:0016791
Cca09g01431 176 SUPERFAMILY HAD-like 23 158 IPR036412 -
Cca09g01431 176 Gene3D - 6 168 IPR023214 -
Cca09g01431 176 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 1 175 IPR010036 GO:0016791
Cca09g01431 176 SFLD Haloacid Dehalogenase 5 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01431 Cca-Chr9 37559474 37561797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g01431 K17619 - gmx:100795199 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01431 09 37559474 37561797 Cca09g01431 09 37559474 37561797 ECH
Cca09g01431 09 37559474 37561797 Cca08g02641 08 60828124 60829422 PCT